Pairwise Alignments

Query, 386 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas putida KT2440

Subject, 384 a.a., penicillin-binding precursor (D-alanyl-D-alanine carboxypeptidase fraction A) transmembrane protein from Sinorhizobium meliloti 1021

 Score =  219 bits (557), Expect = 1e-61
 Identities = 125/353 (35%), Positives = 192/353 (54%), Gaps = 7/353 (1%)

Query: 37  AKSYVLMDASSGNVLVENNGDERLPPASLTKLMTAYIATLDIRRGQIGESDPVTVSENAW 96
           AK   L+DA +G VL   + D  +PPASL KLM   +    + +G++       VSE+AW
Sbjct: 31  AKQIYLVDAETGTVLFSRDEDAPVPPASLAKLMAMEVVFEALDKGELTPETSFEVSEHAW 90

Query: 97  RTGG-----SRMFIKVGSQVTVSDLLHGIIIQSGNDASVALAEHIAGSEDAFADMMNKTA 151
           RTGG     S MF  + S++ V+DL+ G  +Q  NDA + LAE +AGSE AFA++M K A
Sbjct: 91  RTGGAPSGTSTMFAAIKSRIRVADLIQGATVQLANDACIVLAEGMAGSEAAFAELMTKRA 150

Query: 152 ADLGMTNSHFMNPTGLPHPEHYSSAHDMATLARAIINVDPAHYAIYSQKEFFWNNIKQPN 211
            DLG+  + F N TGLPHPE+  +  ++  L R +    P +Y +YSQ EF WN I Q N
Sbjct: 151 RDLGLPVATFKNATGLPHPENKVTMRELVALTRHLYEAHPDYYRLYSQPEFEWNKILQRN 210

Query: 212 RNLLLWRDKTVDGLKTGHTDEAGYCMVASAVRDGQRLIAVVFGTNSEQSRAAETQKLLTY 271
           +N L+  +  VDGL TG  +  G+ +  S  R  +R+   + G  SE+ R  E++++L +
Sbjct: 211 KNPLIAANVGVDGLATGFAEGFGFSLAVSMQRGDRRVYLAMGGLESEKERIEESRRVLDW 270

Query: 272 GFRFFETQTFYQKGTELTQAPVWKGATSQVKAGLADDLTMTMPKGQLKRLQASMTMNPQL 331
               FE +  +  G  + +A V+ GA S+V       + + +P    +RL A +     L
Sbjct: 271 AMTAFEKRRIFADGETIGEASVYGGADSRVALVAGSPVDVLLPVKNPERLTARIVYKWPL 330

Query: 332 TAPIAKGDVIGKVEVKLDEKVIHSADLIALDGVEEGGFFRRMWDSIR--LFFY 382
            AP+A G  +G V++   +K++    +     VE G    R  D+++  LFF+
Sbjct: 331 NAPVAAGQQVGVVKLWNGDKLLREVPVKTARAVEPGTLTSRAIDALQELLFFW 383