Pairwise Alignments

Query, 662 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

 Score =  157 bits (397), Expect = 2e-42
 Identities = 93/284 (32%), Positives = 155/284 (54%), Gaps = 10/284 (3%)

Query: 379 LSLALADRINSLREQQAQTLRDTGRTLEQLNLQ----------LARSNRLKDEFLASVTH 428
           ++++L++    ++    Q   D   TLEQL +Q             + R+K EFLA+++H
Sbjct: 241 MAVSLSEYHVEMQHSIDQATSDLRETLEQLEIQNVELDIAKKRAQEAARVKSEFLANMSH 300

Query: 429 ELRTPMNGVIGSLELMHTLPMGAEMAQYHHTAVGSAQGMMDMVDAILTLSELQAGRLRAQ 488
           ELRTP+NGVIG    M    +    A Y  T   SA  ++ +++ IL  S+L+AG+L  +
Sbjct: 301 ELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSANNLLTIINDILDFSKLEAGKLALE 360

Query: 489 PAPFSLRALLQGLRAGYAGQALGKGLYLSLDIPADLPDGLLGDGQKLAHCLGCLVDNGLK 548
             PF  + +L+ +    A  A  KGL ++L I   +P G++GD  ++   L  LV N +K
Sbjct: 361 NIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIK 420

Query: 549 FTHQGGVMIQVRGRRVGPDDLALTFTVSDSGIGFDDLEQSTLYQRFFQVDGSMTRRYGGL 608
           FT +G + + V  R +  D + L F V D+GIG  + +Q+ L+Q F Q D S++RRYGG 
Sbjct: 421 FTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGT 480

Query: 609 GIGLSICRQMGELLGARLAHESTRGLGSRFELSLNMAISQAQMS 652
           G+GL I +++   +G  ++  S    GS F  +L +  ++  ++
Sbjct: 481 GLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRLHTTELPLN 524