Pairwise Alignments

Query, 210 a.a., 23S rRNA pseudouridine 2457 synthase from Pseudomonas putida KT2440

Subject, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

 Score =  251 bits (640), Expect = 1e-71
 Identities = 122/208 (58%), Positives = 148/208 (71%), Gaps = 5/208 (2%)

Query: 4   PPRNKPRRPQARPAAGPRRQAKAP-----PAEPRLILFNKPFDVLTQFSDGEGRATLKDF 58
           PP    R+  A       + A +P     PAE ++ILFNKP+D L+QF+DG+GR TL D+
Sbjct: 32  PPTRANRKSVANKKKNATQTALSPKRPLSPAERKVILFNKPYDTLSQFTDGDGRKTLADY 91

Query: 59  IDIPGVYPAGRLDRDSEGLLLLTNDGGLQARIADPKHKLAKTYWVQVEGEPSDEQLQRLR 118
           I I  VY AGRLDRDSEGLL+LTNDG LQAR+  P+ K  KTYWVQVEG P +  L+ LR
Sbjct: 92  IPIKDVYAAGRLDRDSEGLLILTNDGILQARLTQPQSKAPKTYWVQVEGSPQESDLEALR 151

Query: 119 DGVELNDGPTLPAEARRLEEPELWPRNPPVRFRKSVPTSWLELVIREGRNRQVRRMTAAV 178
            GV L DGPTLPA+   + EP LWPRNPPVRFR ++PT+WL + + EGRNRQVRRMTA +
Sbjct: 152 HGVTLKDGPTLPAKVDIMPEPTLWPRNPPVRFRAAIPTTWLAITLMEGRNRQVRRMTAHI 211

Query: 179 GLPTLRLVRVRIGDWALDGLEQGCWREV 206
           G PTLRL+R  +GDW L  L+ G WREV
Sbjct: 212 GFPTLRLIRYSMGDWNLGDLQPGEWREV 239