Pairwise Alignments

Query, 210 a.a., 23S rRNA pseudouridine 2457 synthase from Pseudomonas putida KT2440

Subject, 243 a.a., ribosomal large subunit pseudouridine synthase B from Synechococcus elongatus PCC 7942

 Score =  126 bits (317), Expect = 3e-34
 Identities = 79/193 (40%), Positives = 107/193 (55%), Gaps = 18/193 (9%)

Query: 19  GPRRQAKAPPAEPRLILFNKPFDVLTQFSDGEGRATLKDFIDI---PGVYPAGRLDRDSE 75
           G R + K  P E R +L +KP  V++   D + R T+ D +D    PG++P GRLD DS 
Sbjct: 53  GKRLRPKHRP-EARYLLLHKPVGVVSTCRDPQRRRTVIDLVDPEFRPGLHPVGRLDTDSS 111

Query: 76  GLLLLTNDGGLQARIADPKHKLAKTYWVQVEGEPSDEQLQRLRDGVELNDGPTLPAEARR 135
           GLLLL NDG L  +I+ P+  + KTY V VEG P    L+  R GV L+D  TLPA  R 
Sbjct: 112 GLLLLCNDGELTYQISHPRFHIEKTYRVWVEGHPPASVLEHWRSGVWLDDYQTLPAGVRI 171

Query: 136 LEEPELWPRNPPVRFRKSVPTSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGDWAL 195
           L +                 ++ LE+++ EGRNRQ+RR+   +G P LRL RV IG   L
Sbjct: 172 LHD--------------RAESTLLEVILHEGRNRQIRRVAEQLGHPVLRLTRVAIGPLRL 217

Query: 196 DGLEQGCWREVPA 208
             L+ G +R + A
Sbjct: 218 GSLQPGEYRSLTA 230