Pairwise Alignments

Query, 210 a.a., 23S rRNA pseudouridine 2457 synthase from Pseudomonas putida KT2440

Subject, 441 a.a., putative ribosomal large subunit pseudouridine synthase B from Phaeobacter inhibens DSM 17395

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 16/185 (8%)

Query: 28  PAEPRLILFNKPFDVLTQFSDGEGRATLKDFI--DIPGVYPAGRLDRDSEGLLLLTNDGG 85
           P  PRL +++KP  ++T  +D   R T+ D +  D+P V   GRLD +SEGLLLLTNDGG
Sbjct: 103 PEPPRLWMYHKPSGLVTTTNDELDRRTIFDALPEDMPRVMTVGRLDLNSEGLLLLTNDGG 162

Query: 86  LQARIADPKHKLAKTYWVQVEGEPSDEQLQRLRDGVELNDGPTLPAEARRLEEPELWPRN 145
           ++ ++  P     + Y V++ G P D   + LR G+ +              E E +   
Sbjct: 163 IKRQLELPSTGWLRRYRVRINGRPKDTDFEPLRQGLVI--------------EGERFQPM 208

Query: 146 PPVRFRKSVPTSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGDWALDGLEQGCWRE 205
                R+    +WL + +REG+NR++RR    +G    RL+R+  G + L  L+ G   E
Sbjct: 209 TVALDRQQGANAWLTIGLREGKNREIRRAIEDIGFTVNRLLRLSYGPFQLGNLKPGEVEE 268

Query: 206 VPARL 210
           +  R+
Sbjct: 269 LRPRV 273