Pairwise Alignments

Query, 210 a.a., 23S rRNA pseudouridine 2457 synthase from Pseudomonas putida KT2440

Subject, 626 a.a., pseudouridine synthase from Burkholderia phytofirmans PsJN

 Score =  103 bits (256), Expect = 9e-27
 Identities = 71/192 (36%), Positives = 105/192 (54%), Gaps = 25/192 (13%)

Query: 21  RRQAKAPPAEPRLILFNKPFDVLTQFSDGEGRATLKDFIDIPGVYPA-----GRLDRDSE 75
           R+ A  PP   R++L++KP   +   +D EGRA++ D  ++P +  A     GRLD ++E
Sbjct: 266 RKLANKPP---RVLLYHKPTGEIVSHADPEGRASVFD--NLPPMKTAKWLAVGRLDFNTE 320

Query: 76  GLLLLTNDGGLQARIADPKHKLAKTYWVQVEGEPSDEQLQRLRDGVELNDGPTLPAEARR 135
           GLL+LT  G L  R   P++ + + Y V+V GE ++   Q+L +GVEL DG   PA   R
Sbjct: 321 GLLMLTTSGDLANRFMHPRYSVEREYAVRVVGELAEGMRQKLLNGVELEDG---PANFLR 377

Query: 136 LEEPELWPRNPPVRFRKSVPTSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGDWAL 195
           + +      N            W  + + EGRNR+VRRM  A GL   RL+R R G  +L
Sbjct: 378 IRDGGGEGTN-----------HWYHVALAEGRNREVRRMFEAAGLMVSRLIRTRHGPISL 426

Query: 196 -DGLEQGCWREV 206
             GL++G W E+
Sbjct: 427 PKGLKRGRWEEL 438