Pairwise Alignments

Query, 842 a.a., ATP-dependent helicase HrpB from Pseudomonas putida KT2440

Subject, 1320 a.a., ATP-dependent helicase HrpA from Dechlorosoma suillum PS

 Score =  262 bits (670), Expect = 8e-74
 Identities = 170/465 (36%), Positives = 257/465 (55%), Gaps = 23/465 (4%)

Query: 4   LPIDAALPALRQALENRDEVVLEAPPGAGKTTRVPLALLHEPWLAGQSILMLEPRRLAAR 63
           LP++     ++  +E+   V++    G+GKTT++P   L     A   I   +PRRLAAR
Sbjct: 84  LPVNGRREEIKALIEHNQVVIVCGETGSGKTTQLPKICLELGRGAAGLIGHTQPRRLAAR 143

Query: 64  AAAERLASELGEQVGETVGYRIRLDSKVGPKTRIEVVTEGILTRRLQADPALEGVGLLIF 123
           + A R+A EL  Q+G  VG +IR   + GP++ ++++T+GIL    Q DP L     +I 
Sbjct: 144 SVAARVAQELQTQIGAGVGVKIRFQDRSGPQSYLKLMTDGILLAETQTDPYLNAYDTIII 203

Query: 124 DEFHERSLDADLALALSLNGRELLRDDPPLKILLMSATLEGERLSRLLDD----APVVSS 179
           DE HERSL+ D  L      ++LL     LK+++ SAT++ ER ++        APV+  
Sbjct: 204 DEAHERSLNIDFLLGYL---KQLLAKRKDLKVIITSATIDAERFAQHFAQHGKPAPVIEV 260

Query: 180 EGRMHPVDIRWGRPFQPGEFIEPR------VVDCVLHALADQAGSVLVFLPGQAEIRRVH 233
            GR++PV++R+ RP  P E  +        +VD V     +  G VLVFLPG+ EIR   
Sbjct: 261 SGRLYPVEVRY-RPVTPLEEDQEERDLYDAIVDAVHELGREGPGDVLVFLPGEREIREAA 319

Query: 234 QSLQE--VLGARPEILLCPLHGELDLNAQRAAIDPPAKGLRKVVLATNIAETSLTIDGVR 291
           ++L++    G +PEIL  PL   L    Q         G R+VVLATN+AETSLT+ G+R
Sbjct: 320 EALRKHHFPGPQPEIL--PLFSRLSAAEQDRVFK--TGGGRRVVLATNVAETSLTVPGIR 375

Query: 292 VVIDAGLARVPRFDPGSGMTRLDTQRISRASATQRAGRAGRLEPGVCYRLWSEAQHDQLA 351
            V+D GLARV R+   + +  L  +R+S+A+A QRAGR GR+  GVC RL+ EA  +   
Sbjct: 376 YVVDTGLARVKRYSYRNKVEMLQVERVSQAAARQRAGRCGRVAAGVCIRLYDEADFNARG 435

Query: 352 AHGSAEILQADLAGLALQLARWGVTP-EQLRWLDQPPAAAYAQAQDLLARLSAFRPGSRD 410
                EIL++ LAG+ L++    +T  E   +++ PP  A      LL  L      +R 
Sbjct: 436 EFTDPEILRSSLAGVILRMKALKLTDVESFPFIEAPPPKAINDGYSLLQELGGLDEDNR- 494

Query: 411 TLSEHGQAMAELPAHPRIAHLLLRGQDLGLAQMACDVAALLGERD 455
            L++ G+ +A+LP  PRIA +++  +D G  +    +AA L  +D
Sbjct: 495 -LTDVGRGLAKLPLDPRIARMIVAARDRGCLKEVLVIAAALSVQD 538