Pairwise Alignments

Query, 203 a.a., Exonuclease from Pseudomonas putida KT2440

Subject, 241 a.a., DNA polymerase III, epsilon subunit, Proteobacterial from Pseudomonas stutzeri RCH2

 Score = 67.4 bits (163), Expect = 2e-16
 Identities = 55/172 (31%), Positives = 79/172 (45%), Gaps = 9/172 (5%)

Query: 3   RIAVIDFETTGISPGTGCRATEVAVVMLEGGRIVER-YQSLMNAGVPVPAFVAGLTGITT 61
           R  V+D ETTG+    G R  E+  V + G R+  R Y   +     V      + GIT 
Sbjct: 2   RSVVLDTETTGMPVADGHRIIEIGCVEVIGRRLTGRHYHVYLQPDREVDEGAIAVHGITN 61

Query: 62  AMLRSAPPVEKVMNEVAEFVGGTPLLAHNAAFDQKFWDYELGRIGRSRSQPFA--CS--- 116
             L   P    V +E  EF+ G  L+ HNAAFD  F + E   +G+      A  CS   
Sbjct: 62  EFLVDKPRFRDVADEFFEFIKGAQLVIHNAAFDLGFINNEFALLGQQERADIAEHCSVLD 121

Query: 117 -LLLSRRLLPAAPNHKLGTLTRWAGLPDTG-TAHRAMADAEMAANLLQYLAG 166
            LL++R   P   N  L  L +  G+ ++G   H A+ DAE+ A++   + G
Sbjct: 122 TLLMARERHPGQRN-SLDALCKRYGVDNSGRDLHGALLDAEILADVWLTMTG 172