Pairwise Alignments

Query, 203 a.a., Exonuclease from Pseudomonas putida KT2440

Subject, 325 a.a., DNA polymerase III subunit epsilon from Sinorhizobium meliloti 1021

 Score = 42.7 bits (99), Expect = 7e-09
 Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 16/171 (9%)

Query: 3   RIAVIDFETTGISPGTGCRATEVAVVML------EGGRIVERYQSLMNAGVPVPAFVAGL 56
           R  ++D ETTG+     C   E+ +V        E G +V  Y  L    + +P  +  L
Sbjct: 69  RGVILDTETTGLD-ARKCEIIEIGLVSFTYNEEGEIGDVVAVYGGLQQPTIAIPPDITRL 127

Query: 57  TGITTAMLRSAPPVEKVMNEVAEFVGGTPLL-AHNAAFDQKFWDYELGRIGRSRSQPFAC 115
           TGIT AM+ +   ++  +  V   VG   L+ AHNA FD+ F +       R   + +AC
Sbjct: 128 TGITDAMV-AGQSID--IAAVQAIVGPADLIIAHNAGFDRPFCEAFSDVFVR---KAWAC 181

Query: 116 SLLLSRRLLPAAPNHKLGTLTRWAGLPDTGTAHRAMADAEMAANLLQYLAG 166
           S+             KLG L   +G    G  HRA+ D      +L+  +G
Sbjct: 182 SVSEIDWSGRGFEGTKLGYLIGQSGYFHDG--HRAVDDCFALLGVLEQSSG 230