Pairwise Alignments

Query, 443 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

Subject, 499 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  278 bits (712), Expect = 2e-79
 Identities = 162/367 (44%), Positives = 216/367 (58%), Gaps = 5/367 (1%)

Query: 2   NFAKLGLIEPLLRTLQQLDYTTPTPVQAKAIPAVLAGRDLMAAAQTGTGKTAGFALPVLQ 61
           NFA LGL + +L  +    YT PTP+Q  AIP  L  RD++  AQTGTGKTA F LP+L 
Sbjct: 3   NFADLGLSQKVLSAVTDAGYTIPTPIQVGAIPPALQRRDILGIAQTGTGKTASFVLPMLT 62

Query: 62  RLALEGEKVASNSIRALVLVPTRELAEQVHNNVREYAENLPLTTYAVYGGVSINPQMMRL 121
              LE  +  +   R L+L PTRELA QV  N  +Y +N  L    + GGVS + Q  +L
Sbjct: 63  --LLEKGRARARMPRTLILEPTRELAAQVAENFDKYGKNHKLNIALLIGGVSFDEQDRKL 120

Query: 122 RRGVDLLVATPGRLLDLFRQNAVKFNQVQTLVLDEADRMLDLGFAEELQSVYAALPRKRQ 181
            RG D+L+ TPGRLLD   +  +    V+ LV+DEADRMLD+GF  +++ +   +P  RQ
Sbjct: 121 ERGADVLICTPGRLLDHCERGKLLMTGVEILVIDEADRMLDMGFIPDIERIAKLIPFTRQ 180

Query: 182 TLLFSATFSDQIRMLAGLALNDPLSIEVSPRNATAASVKQWLVPVDKK--RKADLFCHLL 239
           TL FSAT   +I+ LA   L +P  +EV+ R++TA +V Q  V    K   K  +   L+
Sbjct: 181 TLFFSATMPPEIQKLADRFLQNPERLEVARRSSTAITVTQRFVAAHGKDYEKRAVLRELI 240

Query: 240 RKQR-WKQVLVFAKTRNGVDQLVERLLAEGVNADGIHGDRPQATRQRALDSFKAREVQVL 298
           R Q   K  ++F   +  V +L   L   G +   +HGD  Q +R   L +FK   +++L
Sbjct: 241 RSQEDLKNAIIFCNRKKDVAELFRSLDRHGFSVGALHGDMDQRSRMAMLANFKDGNIKLL 300

Query: 299 VATDVAARGLDIDDLPLVVNLDLPIVAEDYVHRIGRTGRAGNKGEAISLVCADEVQLLAA 358
           VA+DVAARGLDI D+  V N D+PI AEDYVHRIGRTGRAG  G A ++V   E +   A
Sbjct: 301 VASDVAARGLDIPDVSHVFNFDVPIHAEDYVHRIGRTGRAGRSGAAFTIVTKRETKFSDA 360

Query: 359 IEVLTRQ 365
           IE L  Q
Sbjct: 361 IEKLIGQ 367