Pairwise Alignments

Query, 443 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

Subject, 503 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  310 bits (794), Expect = 7e-89
 Identities = 175/362 (48%), Positives = 232/362 (64%), Gaps = 3/362 (0%)

Query: 3   FAKLGLIEPLLRTLQQLDYTTPTPVQAKAIPAVLAGRDLMAAAQTGTGKTAGFALPVLQR 62
           F +LGL E ++ TL    +  PTP+QA+AIP VL   DL+  AQTGTGKTA F LP++++
Sbjct: 4   FKELGLSEHIVATLSANGFEKPTPIQAQAIPLVLKDHDLIGLAQTGTGKTAAFGLPMIEK 63

Query: 63  LALEGEKVASNSIRALVLVPTRELAEQVHNNVREYAENLPLTTYAVYGGVSINPQMMRLR 122
           L  +G +    +IRALVL PTREL  Q+  N++ + +  PL    V GGVSIN Q  +L 
Sbjct: 64  LVADGRRPDPRNIRALVLAPTRELVNQIAANLKLFVKKSPLKIGLVVGGVSINKQTEQLA 123

Query: 123 RGVDLLVATPGRLLDLFRQNAVKFNQVQTLVLDEADRMLDLGFAEELQSVYAALPRKRQT 182
           RGVD+LVATPGRLLDL  + AV   Q + LVLDEAD+MLDLGF  +L+ +   +P+ RQT
Sbjct: 124 RGVDILVATPGRLLDLVSRKAVTLTQARYLVLDEADQMLDLGFIHDLRKISKLVPKNRQT 183

Query: 183 LLFSATFSDQIRMLAGLALNDPLSIEVSPRNATAASVKQWL--VPVDKKRKADLFCHLLR 240
           LLFSAT    I  LAG  L DP+ +EVSP    A  V+Q++  VP  K  K  +    L 
Sbjct: 184 LLFSATMPKLIAELAGEYLTDPVKVEVSPPGKAADKVEQYVHFVP-GKDLKTTILKQTLT 242

Query: 241 KQRWKQVLVFAKTRNGVDQLVERLLAEGVNADGIHGDRPQATRQRALDSFKAREVQVLVA 300
                  L+F++T++G ++L++ L   G  A  IHG++ Q  R+RAL +F+  E++VLVA
Sbjct: 243 ANPDGLSLIFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIRVLVA 302

Query: 301 TDVAARGLDIDDLPLVVNLDLPIVAEDYVHRIGRTGRAGNKGEAISLVCADEVQLLAAIE 360
           TDVAARG+DI  +  V N DLP V + YVHRIGRT R G  G AI+    DE++LL  IE
Sbjct: 303 TDVAARGIDIPGVTHVYNYDLPEVPDAYVHRIGRTARNGRDGIAIAFCAPDEIRLLRDIE 362

Query: 361 VL 362
            L
Sbjct: 363 KL 364