Pairwise Alignments

Query, 443 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

Subject, 432 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  325 bits (834), Expect = 1e-93
 Identities = 173/380 (45%), Positives = 241/380 (63%)

Query: 1   MNFAKLGLIEPLLRTLQQLDYTTPTPVQAKAIPAVLAGRDLMAAAQTGTGKTAGFALPVL 60
           M F        +L+ L +  Y T TP+Q  AIP V  G+D++A+AQTGTGKTA FALP+L
Sbjct: 1   MKFESYSFAPEILQALAECGYETMTPIQRLAIPPVRRGQDVLASAQTGTGKTAAFALPIL 60

Query: 61  QRLALEGEKVASNSIRALVLVPTRELAEQVHNNVREYAENLPLTTYAVYGGVSINPQMMR 120
           Q+L    +   +   RAL+L PTREL EQ+ NN++ YA++L L    V+GG   + Q  +
Sbjct: 61  QKLLDTPKAREATKARALILAPTRELTEQIANNIKAYAKHLELAVTTVFGGGKTDVQAQK 120

Query: 121 LRRGVDLLVATPGRLLDLFRQNAVKFNQVQTLVLDEADRMLDLGFAEELQSVYAALPRKR 180
           LR+G D++VATPGRLL+      +    V+ LVLDEADRMLD+GF  ++Q +  A  ++R
Sbjct: 121 LRKGTDIIVATPGRLLEHLLAGNLSLAAVEFLVLDEADRMLDMGFIADIQKLIQACNKER 180

Query: 181 QTLLFSATFSDQIRMLAGLALNDPLSIEVSPRNATAASVKQWLVPVDKKRKADLFCHLLR 240
           QTL+FSATFS  +R LA   +     +     N  A +V Q + PV+++RK +L   L+ 
Sbjct: 181 QTLMFSATFSGGVRKLADEIMKKHTVLTADRHNTAATTVSQVVYPVEQRRKRELLSELIG 240

Query: 241 KQRWKQVLVFAKTRNGVDQLVERLLAEGVNADGIHGDRPQATRQRALDSFKAREVQVLVA 300
           ++ W++VLVF+ TR   ++L E L  +G+ +  IH ++ Q TR+RAL  F   +++VLV+
Sbjct: 241 RKNWQRVLVFSATREDCEKLTEELNLDGIPSAVIHSEKAQGTRRRALKDFTEGKIRVLVS 300

Query: 301 TDVAARGLDIDDLPLVVNLDLPIVAEDYVHRIGRTGRAGNKGEAISLVCADEVQLLAAIE 360
           T+VAARGLDI DL  VVN DLP + EDYVHR+GRTGRAG  G AIS V  +E + LA IE
Sbjct: 301 TEVAARGLDIPDLEYVVNFDLPFLPEDYVHRVGRTGRAGKSGVAISFVSREEERTLADIE 360

Query: 361 VLTRQTLPRHEEPDFIPEHR 380
            L  Q L R   P +   +R
Sbjct: 361 KLIGQRLKRIVMPGYEVSNR 380