Pairwise Alignments

Query, 443 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

Subject, 474 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  359 bits (921), Expect = e-103
 Identities = 208/460 (45%), Positives = 273/460 (59%), Gaps = 18/460 (3%)

Query: 1   MNFAKLGLIEPLLRTLQQLDYTTPTPVQAKAIPAVLAGRDLMAAAQTGTGKTAGFALPVL 60
           M F +LGL   +L+ + ++ Y   TP+Q +AIP VL G+DL A AQTGTGKTA F LP++
Sbjct: 1   MRFDELGLAPEILKAVTEMGYAEATPIQQQAIPLVLQGKDLKACAQTGTGKTAAFTLPLI 60

Query: 61  QRLA---LEGEKVASNSIRALVLVPTRELAEQVHNNVREYAENLPLTTYAVYGGVSINPQ 117
           QRL          A + +RAL+L PTRELA QV+ +V+ Y +     +  ++GGV I PQ
Sbjct: 61  QRLLHLDTASPSPAKHPVRALMLAPTRELALQVYESVKSYTKYTHFRSICLFGGVDIKPQ 120

Query: 118 MMRLRRGVDLLVATPGRLLDLFRQNAVKFNQVQTLVLDEADRMLDLGFAEELQSVYAALP 177
           +  +++GV+ +VATPGRLLD   Q +V FNQVQ LVLDEADRMLD+GF  ++Q +   LP
Sbjct: 121 IAEMKKGVEFVVATPGRLLDHVEQKSVSFNQVQALVLDEADRMLDMGFIPDIQRILNMLP 180

Query: 178 RKRQTLLFSATFSDQIRMLAGLALNDPLSIEVSPRNATAASVKQWLVPVDKKRKADLFCH 237
           + RQ+LLFSATFS++I+ LA   L  P+ +EV+ RN    ++   + PV + RK DL   
Sbjct: 181 KTRQSLLFSATFSNEIQRLADTMLQSPILVEVARRNQVNDTITHRVHPVAETRKKDLLIK 240

Query: 238 LLRKQRWKQVLVFAKTRNGVDQLVERLLAEGVNADGIHGDRPQATRQRALDSFKAREVQV 297
           LLR     Q LVF +T+ G  +L   L   G+ AD IHGD+ Q  R +ALD+FK    +V
Sbjct: 241 LLRSGEITQTLVFMRTKQGCGRLARELERAGIAADSIHGDKSQNERIKALDAFKNGGCKV 300

Query: 298 LVATDVAARGLDIDDLPLVVNLDLPIVAEDYVHRIGRTGRAGNKGEAISLVCADEVQLLA 357
           LVATDVAARGLDID LP V+N +LP   EDYVHRIGRTGRAG +G AISLVCA EV  LA
Sbjct: 301 LVATDVAARGLDIDHLPYVINFELPHTPEDYVHRIGRTGRAGRQGNAISLVCAHEVGYLA 360

Query: 358 AIEVLTRQTLPRHEEPDFIPE------------HRVPMTDASGQVIKKPKKPKKPKENS- 404
            IE L +  + +     F PE             R   T A  Q +    KP   + N  
Sbjct: 361 DIEKLIKMQIEQVAVAGFEPEMDYEYPPGSGKKRRAHETHAPSQPVAGRSKPPVKRNNMI 420

Query: 405 AKRG--LGRWMDSTEAASAEPAVKAVRKVPSFNGGPRKRK 442
           AK G    +  +   A +  P+ +     P     P K K
Sbjct: 421 AKDGFDFSKPYEPKAAPATVPSKEEAAHTPVGKPDPHKPK 460