Pairwise Alignments

Query, 443 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

Subject, 473 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  386 bits (991), Expect = e-112
 Identities = 207/384 (53%), Positives = 266/384 (69%), Gaps = 7/384 (1%)

Query: 1   MNFAKLGLIEPLLRTLQQLDYTTPTPVQAKAIPAVLAGRDLMAAAQTGTGKTAGFALPVL 60
           M F  LGL   +LR + +  YT PTP+Q +AIPAVLAGRDLMA AQTGTGKTAGF LP+L
Sbjct: 1   MLFTDLGLKAEILRAIAEQGYTEPTPIQQQAIPAVLAGRDLMACAQTGTGKTAGFTLPIL 60

Query: 61  QRL--ALEGEKVASNSIR---ALVLVPTRELAEQVHNNVREYAENLPLTTYAVYGGVSIN 115
           Q L  A  GE   +   R    L+L PTRELA QV  +VR Y ++LPL + +++GGV +N
Sbjct: 61  QLLSQAQAGESPLNRLARKPRVLILAPTRELALQVEESVRTYGQHLPLKSMSMFGGVGMN 120

Query: 116 PQMMRLRRGVDLLVATPGRLLDLFRQNAVKFNQVQTLVLDEADRMLDLGFAEELQSVYAA 175
           PQ+  L+RGVD+LVA PGRLLD   Q  +  + ++ LVLDEADRMLD+GF  +++ + A 
Sbjct: 121 PQIAALKRGVDILVACPGRLLDHINQRTLDLSGIEILVLDEADRMLDMGFIRDIRKILAL 180

Query: 176 LPR--KRQTLLFSATFSDQIRMLAGLALNDPLSIEVSPRNATAASVKQWLVPVDKKRKAD 233
           LP   KRQ LLFSATFSD+I+ LA   L+DP SIEV+ RN T  +V Q ++ VD+++K D
Sbjct: 181 LPPNGKRQNLLFSATFSDEIKELARSFLHDPQSIEVARRNTTVETVSQKVIHVDREKKKD 240

Query: 234 LFCHLLRKQRWKQVLVFAKTRNGVDQLVERLLAEGVNADGIHGDRPQATRQRALDSFKAR 293
           +  HL   + W QVL+F +T++G D L  RL  EG+ +  +HG++ Q  R RAL  FK  
Sbjct: 241 VLLHLFENRGWNQVLIFTRTKHGADALSRRLDKEGIRSAALHGNKTQGARVRALTEFKEG 300

Query: 294 EVQVLVATDVAARGLDIDDLPLVVNLDLPIVAEDYVHRIGRTGRAGNKGEAISLVCADEV 353
           ++  LVATD+AARG+DID LP VVN +LP VAEDYVHRIGRTGRAG +GEAISLVC DE 
Sbjct: 301 KLVALVATDIAARGIDIDQLPYVVNYELPNVAEDYVHRIGRTGRAGAEGEAISLVCHDER 360

Query: 354 QLLAAIEVLTRQTLPRHEEPDFIP 377
             L +IE L ++ L +   P F P
Sbjct: 361 DNLRSIERLIKKDLEKEVLPGFEP 384