Pairwise Alignments

Query, 443 a.a., ATP-dependent RNA helicase from Pseudomonas putida KT2440

Subject, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

 Score =  283 bits (724), Expect = 9e-81
 Identities = 153/374 (40%), Positives = 227/374 (60%), Gaps = 6/374 (1%)

Query: 2   NFAKLGLIEPLLRTLQQLDYTTPTPVQAKAIPAVLAG-RDLMAAAQTGTGKTAGFALPVL 60
           +F  LGL + +L  L++  +T PTP+Q +AIP ++ G RD++  AQTGTGKTA F +P+L
Sbjct: 3   SFKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62

Query: 61  QRLALEGEKVASNSIRALVLVPTRELAEQVHNNVREYAENLPLTTYAVYGGVSINPQMMR 120
           + +        S + +AL+L PTRELA QV   +     +  L  + VYGG SI+ Q+  
Sbjct: 63  ETIDEH-----SRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRE 117

Query: 121 LRRGVDLLVATPGRLLDLFRQNAVKFNQVQTLVLDEADRMLDLGFAEELQSVYAALPRKR 180
           LRRGV ++V TPGR+LD   +  +K   V  +VLDEAD ML++GF ++++ +  ++   +
Sbjct: 118 LRRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTDK 177

Query: 181 QTLLFSATFSDQIRMLAGLALNDPLSIEVSPRNATAASVKQWLVPVDKKRKADLFCHLLR 240
           + LLFSAT  D I  LA   + +   I+V  +  T     Q    +  + K +L   ++ 
Sbjct: 178 RMLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRIID 237

Query: 241 KQRWKQVLVFAKTRNGVDQLVERLLAEGVNADGIHGDRPQATRQRALDSFKAREVQVLVA 300
            ++    L+F KT+  VD++  RL  +G  A+G+HGD  QA R++ LD FK +++ VLVA
Sbjct: 238 TEKEFYGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVLVA 297

Query: 301 TDVAARGLDIDDLPLVVNLDLPIVAEDYVHRIGRTGRAGNKGEAISLVCADEVQLLAAIE 360
           TDVAARG+DI+DL  VVN D+P   E YVHRIGRTGRAG +G AI+ V   E +    I+
Sbjct: 298 TDVAARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKYIQ 357

Query: 361 VLTRQTLPRHEEPD 374
            + +  + R E PD
Sbjct: 358 KIAKTEIKREEVPD 371