Pairwise Alignments

Query, 304 a.a., Histone deacetylase family protein from Pseudomonas putida KT2440

Subject, 309 a.a., Histone deacetylase superfamily (NCBI) from Rhodospirillum rubrum S1H

 Score = 73.9 bits (180), Expect = 4e-18
 Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 17/207 (8%)

Query: 93  VRAVGGSLLTAEMALQHGIACHLAGGT---HHAHYDHPAGFCIFNDLAVISRYLLEAGRV 149
           +RA GG +   +  +   +           HHA      GFC+FN+ A+ + +       
Sbjct: 94  LRAAGGMVQAVDAVMDKSVRNAFVAVRPPGHHAELATAMGFCLFNNAAIGAYHARARWGA 153

Query: 150 HRVLIFDCDVHQGDGTARILHDTPEAITVSLHCEQNFPARKAQSDW-------DIPLPRG 202
            RV + D DVH G+GT  I  D P     S H   +FP      +        + PL  G
Sbjct: 154 ERVAVIDWDVHHGNGTQHIFWDDPAMFYASTHEAHSFPNTGFVDETGGHGNIVNCPLRSG 213

Query: 203 MGDTAYLKVVDDALNYLLPLYQPDLVLYDAGVDVHKDDALGYLQLTDAGVAARDEAVLRH 262
                + +   + +   L  + PDL++  AG D H  D +  L L  A      E VL  
Sbjct: 214 ADGLRFREAFTERITPALRAFAPDLIIISAGFDAHVMDPMANLNLKVADFVWATEQVLD- 272

Query: 263 CLGRDI---PVMGVIGGGYSKDRTALA 286
            +  D+    V+ V+ GGY  D TALA
Sbjct: 273 -VANDVCDSRVVSVLEGGY--DLTALA 296