Pairwise Alignments

Query, 233 a.a., transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 248 a.a., Predicted D-glucarate or D-galactorate regulator, GntR family from Pseudomonas fluorescens FW300-N2E2

 Score =  202 bits (513), Expect = 6e-57
 Identities = 115/231 (49%), Positives = 151/231 (65%), Gaps = 4/231 (1%)

Query: 3   PEHARKRGHSRAHDLVSSLTQQILLGTFKPGDKLPSENTLVREHGVSRTVVREALSKLQA 62
           P   RKR  S A +LV+ LT+QI  G  K GDKLP+E+ ++  HGVSRTVVREA+S+LQA
Sbjct: 8   PRFPRKR-RSLAQELVTVLTEQIRDGLLKRGDKLPTESAIMEAHGVSRTVVREAISRLQA 66

Query: 63  SGLVEPRHGIGTFVMERQAQAGLRVAAESAANVRD---LLELRIGLEGQAAALAALRRDE 119
           +G VE RHGIGTFV++  + +G R+   +   +RD   +LELRI LE ++A LAA RR +
Sbjct: 67  AGQVETRHGIGTFVLDTPSPSGFRIDPATVVTLRDVLAILELRISLEVESAGLAAQRRSD 126

Query: 120 GHLARMRQALDDYQDLAAAGDSCIEADRRFHLLIAEATGNLYFTEMLLQLGNGLIPRNRM 179
             LA MR ALD   + AA     + +D  FHL IA +TGN YFT+++  LG  +IPR R+
Sbjct: 127 EQLAAMRAALDALNESAAHASDAVASDFAFHLEIALSTGNRYFTDIMTHLGTSIIPRTRV 186

Query: 180 AQAERAGAKLARQAYLANLEHEAILNAIRRQDPDAARAAVCLHLSNSRDRL 230
             A  A     R     + EHE I +AI RQD +AARAA+ LHL+NSR+RL
Sbjct: 187 NSARLAHDDQQRYMNRLSREHEEIYDAIARQDSEAARAAMRLHLTNSRERL 237