Pairwise Alignments

Query, 266 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 254 a.a., transporter substrate-binding domain-containing protein from Methanococcus maripaludis S2

 Score = 40.8 bits (94), Expect = 3e-08
 Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 2/118 (1%)

Query: 25  TITPGVLTVAAYVFPPYSIPGPNNQLSGVDGEIIKRIAERECLKVKTMVVDTAAVVQAVV 84
           T+  G LTV      P +I   N  L+G D +++  IA+R  L     + ++ + +   +
Sbjct: 29  TMKRGTLTVGVCAQYPPTIYEENGNLAGFDFDLMNEIAKRMNLNTDFKIYNSKSELFDAL 88

Query: 85  AKRADVGIGDWYRTAERSKALGLSAPLYLDVMGIISDE--GYTKISELDGKRIGTVQG 140
            K     IG      ER K +  +   Y D + +   E    T + EL GK +G ++G
Sbjct: 89  EKNEVDCIGSRTVNYERRKFVDFTRVYYYDSVRVAVPESSSVTLLKELKGKNLGVIEG 146