Pairwise Alignments

Query, 266 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 250 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score = 46.2 bits (108), Expect = 7e-10
 Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 5/132 (3%)

Query: 47  NNQLSGVDGEIIKRIAERECLKVKTMVVDTAAVVQAVVAKRADVGIGDWYRTAERSKALG 106
           + +  G + E+I  I++R  L+ + +V   + ++ AV     D GIG   +T ER   + 
Sbjct: 48  DGEFKGFEVELIYEISKRLDLQPEFVVYSFSELLDAVSEGEVDCGIGYIGKTPERQLKMD 107

Query: 107 LSAPLYLDVMGII--SDEGYTKISELDGKRIGTVQGYL---WVDDLKKAFGDNLVLYPNP 161
            S P       I+  SD     I  L+ K +G ++  +   W++ L K+    +++Y N 
Sbjct: 108 FSRPYGYTYSTILVRSDSNCVGIKCLENKSVGVLKDSIEEYWLESLLKSMDFKIIIYENQ 167

Query: 162 VAMAQDLTSRRI 173
             +  DL S +I
Sbjct: 168 NDINNDLLSGKI 179