Pairwise Alignments

Query, 266 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

Subject, 275 a.a., amino acid ABC transporter, amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 47.8 bits (112), Expect = 3e-10
 Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 13/128 (10%)

Query: 42  SIPG----PNNQLSGVDGEIIKRIAERECLKVKTMVVDTAAVVQAVVAKRADVGIGDWYR 97
           SIPG       +  G D +I   IA+R  + ++ + V+    +  V   R D+ + +   
Sbjct: 44  SIPGGFYNEKGEWGGFDYDIATEIAKRMGVDIERVQVNNKTRIAYVQQGRVDISVSNMTH 103

Query: 98  TAERSKALGLSAPLYLDVMGIISDEGYTK-ISELDGKRIGTVQGYLWVDDLKKAF---GD 153
           T ER K++  S   + D   +++ +G  K + ++ GK+I T+QG     ++K+A    GD
Sbjct: 104 TRERDKSVDFSITYFFDGQKVLAKKGQFKSVKDMVGKKIATMQGTTSEVNVKRALKEAGD 163

Query: 154 NLVLYPNP 161
                PNP
Sbjct: 164 -----PNP 166