Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 522 a.a., Mobile element protein from Pseudomonas fluorescens FW300-N2E2

 Score =  286 bits (732), Expect = 1e-81
 Identities = 172/483 (35%), Positives = 268/483 (55%), Gaps = 16/483 (3%)

Query: 29  DKGQIVDLKEQVKLLRDRLFNRKSEQTVESNTPQLALFNEPESQWVPTADDADEEVVAPS 88
           D+  I  L  ++  L+   F ++SEQ        L    + +   +     A + V+AP+
Sbjct: 50  DQTVIEKLTHEIAQLKRLKFAKRSEQMNPEQAGLLDDLVDTDIAAIEAELQALQTVLAPT 109

Query: 89  --KQRGKRKPLSADLPRIEVIHDLPEHELTCACGCRKHVVGEQTSEQLDIVPMQIRVLKH 146
             KQ+ KR  LSA+ PR  + H+       CAC  ++  +GE  SE+LD  P    V +H
Sbjct: 110 EKKQKPKRTALSAEFPRTLIHHEPDNTHCPCACALKR--IGEDVSEKLDYTPGVFTVERH 167

Query: 147 VRKIYGCRGCETAPVTADKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLNRHGI 206
           +R  + C  CET  + A  PAQ+I+K + +  +LA ++  K+ D LPL+R E++  R G+
Sbjct: 168 IRGKWVCDDCETL-IQAPVPAQVIDKGIPTAGLLAHVMIAKFADHLPLYRQESIFGRAGL 226

Query: 207 EIPRQTLARWVIQCSEHFQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWV 266
            IPR TLA+WV       QPL++ +RD +L   VIH DET VQ+L  P    T +S++W 
Sbjct: 227 AIPRSTLAQWVGVTGVQLQPLVDALRDVVLGQQVIHADETPVQMLV-PGSKKTQRSYVWA 285

Query: 267 QASGP-PDRQVVLFDYTTSRAQEVPLRLLEGYRGYVMTDDYAGYNALALQPGVERLACMA 325
             +    +   V++D++ SRA E     L+ ++  ++ DD+ GY A + + GV  + CMA
Sbjct: 286 YTTSQFSNLAAVVYDFSPSRAGEHARNFLQDWKCKLVCDDFGGYKA-SFELGVTEIGCMA 344

Query: 326 HVRRKFVEAQKVQPKGKSGRADVALTMINKLYGIERDLKDASDEQRFIGRQERSLPILEQ 385
           H RRKF E   +    KS  A+ AL  I  LY IE +++D   + R   RQER++P+++ 
Sbjct: 345 HARRKFFE---LHATNKSTLAEQALRYIQLLYEIESEVRDLEPDLRRRIRQERAVPVMDM 401

Query: 386 LKSWLDKTHSQVTPQSVLGKAVLYLANNWNRLERYVEAGHLPIDNNLAERAIKPFVIGRK 445
           L +W+      V   S + +A+ Y    W  L RY++ G +PIDNN  E  I+P+ +GRK
Sbjct: 402 LHAWMIAQRDLVPEGSAISRALDYSLKRWAALSRYLDDGDVPIDNNWCENQIRPWALGRK 461

Query: 446 AWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLP--HASSVADYEALLPWN 503
            WLF+ + +    +A I SL+++A++NG +PY +L+ VL RLP  HAS   D + LLP  
Sbjct: 462 NWLFAGSLRSGKRAAAIMSLIQSARLNGHDPYAYLKDVLTRLPTQHAS---DIDQLLPHQ 518

Query: 504 CSP 506
            +P
Sbjct: 519 WTP 521