Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 246 a.a., transposase number 3 for insertion sequence ISRM28 from Sinorhizobium meliloti 1021

 Score =  108 bits (269), Expect = 3e-28
 Identities = 75/219 (34%), Positives = 106/219 (48%), Gaps = 15/219 (6%)

Query: 5   PDNLPDDPAALKLLLAQLLAERTVDKGQIVDLKEQVKLLRDRLFNRKSEQTVESNTPQLA 64
           PD LP D A L  ++  L AE         DLK +V  L  +LF  KSE+    +  Q  
Sbjct: 5   PDPLPQDAAQLSRIILSLDAENA-------DLKARVAFLEGQLFGPKSEKMTAIDPTQAT 57

Query: 65  LFNEPESQWVPTADDADEEVVAPSKQRGKRKP------LSADLPRIEVIHDLPEHELTCA 118
           L     S  +P A + D   VA   ++ +R P      L   LPR E + + PE ++   
Sbjct: 58  LELGDLSD-IPEAANDDVAPVAEGPRQERRSPSRNIGRLPKHLPRYEELIE-PESKICPC 115

Query: 119 CGCRKHVVGEQTSEQLDIVPMQIRVLKHVRKIYGCRGCETAPVTADKPAQLIEKSMASPS 178
           C    H +G   SE LDIVP  +RV + +R  Y CR CE+  V A  PA++++  M + +
Sbjct: 116 CSFELHCIGTDISEALDIVPAVVRVKRTIRPRYACRACESVIVQAPAPARMMDGGMVTTA 175

Query: 179 VLAMLLTTKYVDGLPLHRFETVLNRHGIEIPRQTLARWV 217
             A +  +K+   LPLHR   +L   G+ I R TL  WV
Sbjct: 176 FAAHIAVSKFAWHLPLHRQAQMLASCGVIIDRGTLGAWV 214