Pairwise Alignments

Query, 510 a.a., transposase from Pseudomonas putida KT2440

Subject, 545 a.a., Transposase from Sinorhizobium meliloti 1021

 Score =  222 bits (566), Expect = 2e-62
 Identities = 169/543 (31%), Positives = 258/543 (47%), Gaps = 49/543 (9%)

Query: 1   MISVPDNLPDDPAALKLLLAQLLAERTVDKGQ-------IVDLKEQVKLLRDRLFNRKSE 53
           M +   NLPDDPA LK ++A L AE              I +L+ ++  L+ ++F + SE
Sbjct: 6   MSNASQNLPDDPAFLKAMIAALQAENAKMSATLQAHDQLIGELRLRIAKLKKQVFGKSSE 65

Query: 54  QTVESNTPQLALFNEP------ESQWVPTADDADEEVVAPSKQRGKRKPLSADLPRIEVI 107
           + +E    QL L  E       E+   P  D+ D  V A        K +    PR+   
Sbjct: 66  K-IEREIQQLELALEDLLIAAAENSTKPL-DEVDAAVPAAPVASRPEKTMRRR-PRVSEK 122

Query: 108 HDLPEHEL---TCA--CGCRKHVVGEQTSEQLDIVPMQIRVLKHVRKIYGCRGCETAPVT 162
                 EL   TC   CG    +VGE  SE LD++  Q++V++  R    CR CE   V 
Sbjct: 123 AARERKELDPGTCCPDCGGELRLVGEDASEILDMIAAQMKVIEVARLKKSCRCCEKM-VQ 181

Query: 163 ADKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLNRHGIEIPRQTLARWVIQCSE 222
              P++ I  SMA   +LA +L +K+ D LPL+R   +  R G +IP  TL  W  +  +
Sbjct: 182 LPAPSRPIPGSMAGAGLLAYILVSKFDDHLPLYRLNEIFARMGADIPDSTLVDWCGRAMQ 241

Query: 223 HFQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDP-------TSQSWMWVQ------AS 269
             QPL+  +   ++ S ++H D+T ++VL    RD          + W +V+       +
Sbjct: 242 VLQPLIERIEAVVMSSDLLHADDTPIRVLDRSLRDKGLGKGVKKGRIWTYVRDQRPWAGA 301

Query: 270 GPPDRQVVLFDYTTSRAQEVPLRLLEGYRGYVMTDDYAGYNALALQPGVERL------AC 323
            PP     ++ +     +E     L    G +  D Y GY  L  +PG + +      AC
Sbjct: 302 APPG---AVYYFAPDWKEEHVHHHLRQTSGILQADGYKGYGKL-YEPGADGIGRFREAAC 357

Query: 324 MAHVRRKFVEAQKVQPKGKSGRADVALTMINKLYGIERDLKDASDEQRFIGRQERSLPIL 383
            AH RR F +   +    KS  A  AL  I  LY IERD+     + R   RQ+ S   +
Sbjct: 358 WAHWRRDFHD---IWTSNKSEIAREALDRIGALYDIERDIAGQPADIRLAARQKHSTAKV 414

Query: 384 EQLKSWLDKTHSQVTPQSVLGKAVLYLANNWNRLERYVEAGHLPIDNNLAERAIKPFVIG 443
           E L+ W +   +++  +  L  A  Y  + W+    ++E G + +DNN AERA++P  IG
Sbjct: 415 EALRVWAEAQLTRIPGKGDLASAFRYGLSRWHSFCLFLEDGRVAMDNNAAERALRPIGIG 474

Query: 444 RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPHASSVADYEALLPWN 503
           RK WLF+    GA   A+  +++ETAK+NG +P  +L  VL+R+ H   +   + LLPWN
Sbjct: 475 RKNWLFAGADTGAETLARAMTIIETAKMNGIDPQAYLADVLDRI-HDHKINRLDELLPWN 533

Query: 504 CSP 506
            +P
Sbjct: 534 WAP 536