Pairwise Alignments

Query, 489 a.a., Type I restriction enzyme EcoEI M protein from Pseudomonas putida KT2440

Subject, 658 a.a., Type I restriction-modification system methyltransferase subunit from Pseudomonas stutzeri RCH2

 Score = 77.0 bits (188), Expect = 2e-18
 Identities = 78/286 (27%), Positives = 127/286 (44%), Gaps = 42/286 (14%)

Query: 109 FEDAYNYMKSGQLLRQVINKIQEGVDFNRAQERHEFGNLYEQLLRDLQNAGN--AGEFYT 166
           FED    +++  LL QV+ +                G ++E+L+R    + N  AGE +T
Sbjct: 120 FEDFVQQLETANLLYQVVQRFAATDLSPEFISNFGMGIIFEELIRKFAESSNETAGEHFT 179

Query: 167 PRPVTEFMVRMV----DPKLAEK----VMDPACGTGGFLTCAIEHKRRRYVKTAEDERTL 218
           PR +      +V    D KL       + DP  GTGGFL+   E     Y+++  ++  +
Sbjct: 180 PRDIVHLTTSLVITNQDHKLTPNSIVTIYDPTAGTGGFLSEGDE-----YIQSISEK--V 232

Query: 219 QASIFGVEKKPLPHLLATTNMILHGIEVPSQIRHDNTLSKPLISWGPSERVHCIVANPPF 278
             S+ G E  P  + +   +M++ G +V S I+  NTLS   ++    +R   +++NPPF
Sbjct: 233 SVSLHGQELNPESYAICKADMLIKGQDVAS-IKLGNTLSNDQLA---DKRFDFMLSNPPF 288

Query: 279 G------------GMEEDGIETNF-PAAFRTRETADLFLVLIMQLLKD----GGRAAVVL 321
           G                 G +  F P   R  + + LFL+ ++  ++D    G R  ++L
Sbjct: 289 GVEWKKVQKQITDEHSHKGFDGRFGPGLPRVSDGSLLFLLHLVSKMRDPRDGGSRIGIIL 348

Query: 322 PDGFLFGEGI---KSRIKEKLLTECNLHTIVRLPNGVFNPYTGIKT 364
               LF  G    +S I+  LL    +  IV LP  +F   TGI T
Sbjct: 349 NGSPLFTGGAGSGESEIRRYLLQNDLVEAIVALPTDMFY-NTGIAT 393