Pairwise Alignments

Query, 489 a.a., Type I restriction enzyme EcoEI M protein from Pseudomonas putida KT2440

Subject, 502 a.a., Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) from Xanthomonas campestris pv. campestris strain 8004

 Score =  109 bits (273), Expect = 2e-28
 Identities = 113/405 (27%), Positives = 185/405 (45%), Gaps = 46/405 (11%)

Query: 105 VRSVFED-AYNYMKSGQ------LLRQVINKIQE---GVDFNRAQERHEFGNLYEQLLRD 154
           +R VF+D ++N  K G+      LLR ++    +    +  +R  +    GN YE L+++
Sbjct: 114 LRDVFQDISFNANKLGEEQQKNDLLRHLLEDFAKPALNLRPSRIGQLDIIGNAYEYLIKN 173

Query: 155 LQNAGN--AGEFYTPRPVTEFMVRMVDPKLAEKVMDPACGTGGFLTCAIEHKRRRYVKTA 212
             ++    AGEFYTP  V+  M R++DP+  +++ DP CG+G  L      K  R ++  
Sbjct: 174 FASSSGKKAGEFYTPPEVSALMARLMDPQQGDEICDPTCGSGSLLL-----KCGRLIR-- 226

Query: 213 EDERTLQASIFGVEKKPLPHLLATTNMILHGIEVPSQIRHDNTLSKP-LISWGPSERVHC 271
           E   + + +++G E       LA  NM LHG E   +I   +T+  P L++    +    
Sbjct: 227 ERTGSGKYALYGQEAIGSTWALAKMNMFLHG-EDNHRIEWGDTIRNPKLLAGNHLKHFDI 285

Query: 272 IVANPPFG--GMEEDGIETNFPAAF------RTRETADLFLVLIMQLLKDGGRAAVVLPD 323
           +VANPPF       D  +T+    F      RT+      L +I  +    GR AVV+P 
Sbjct: 286 VVANPPFSLEKWGHDSADTDPHDRFRRGLPPRTKGDYAFILHMIATMKPRTGRMAVVVPH 345

Query: 324 GFLFGEGIKSRIKEKLLTECNLHTIVRLPNGVFNPYTGIKTNLLFFTKGTPTKQVWFYE- 382
           G LF    + RI++KL+ E  L  ++ LP  +F   TGI   +L F      K+V F + 
Sbjct: 346 GVLFRGAAEGRIRQKLIEENLLDVVIGLPEKLFYG-TGIPAAVLVFRTKKKDKKVLFIDA 404

Query: 383 -HQYPAGVKNYSKTRPMRIEEFAVEEAWWGSEADGFAARAE-NAFAWQVSVEELQARNWN 440
             QY  G KN +  R   ++             D   AR   + +A+  S +E+   ++N
Sbjct: 405 SRQYQDG-KNQNLLRESDLQRI----------LDTVQARQNVDKYAYLASPDEIAGHDYN 453

Query: 441 LDCKN--PHTGEQVSHDPDELLRNYASVQDEISDLRDQLKAVLAE 483
           L+         E+   D   + R    ++ E++ L  Q+ A L E
Sbjct: 454 LNIPRYVDTFEEEAEIDLMAVRREREQLKGELATLEMQMAAYLKE 498