Pairwise Alignments

Query, 489 a.a., Type I restriction enzyme EcoEI M protein from Pseudomonas putida KT2440

Subject, 675 a.a., type I restriction-modification from Synechococcus elongatus PCC 7942

 Score = 70.9 bits (172), Expect = 1e-16
 Identities = 87/345 (25%), Positives = 144/345 (41%), Gaps = 58/345 (16%)

Query: 69  DPEGMTGDALKDFIDNNLFPQLQNLHEYSNTPSAFVVRSVFEDAYNYMKSGQL----LRQ 124
           D + + GDA  D I  NL   +Q       TP+   VR +F+    +++  +L    L  
Sbjct: 178 DLKQLMGDA--DNIGENLRAYIQGF-----TPA---VRDIFDSFEFHLQIDRLEKAGLLY 227

Query: 125 VINKIQEGVDFNR-AQERHEFGNLYEQLLRDLQNAGN--AGEFYTPRPVTEFMVRMV--- 178
           ++ +    +D +       E G ++E+L+R      N  AGE +TPR V   MV ++   
Sbjct: 228 LVTERFAQIDLHPDTVSNAEMGLVFEELIRKFAELSNETAGEHFTPREVIRLMVNLLFIE 287

Query: 179 ------DPKLAEKVMDPACGTGGFLTCAIEHKRRRYVKTAEDERTLQASIFGVEKKPLPH 232
                  P +   + DP  GTGG L+ A EH         E   + +  + G E  P  +
Sbjct: 288 DDAALTQPGIVRSLYDPTAGTGGMLSVAEEH-------LTELNPSARLVLSGQELNPESY 340

Query: 233 LLATTNMILHGIEVPSQIRHDNTLSKPLISWGPSERVHCIVANPPFG------------G 280
            +   +M++ G  +   I   NTLS   +   P  +   +++NPPFG             
Sbjct: 341 AICKADMLIKGQNI-QNICFGNTLSDDKL---PDAKYDYMLSNPPFGVEWKKIQKEVQRE 396

Query: 281 MEEDGIETNF-PAAFRTRETADLFLVLIMQLLK----DGGRAAVVLPDGFLFGEGI---K 332
            E+ G    F P   R  + + LFL+ ++  ++     G R  +VL    LF  G    +
Sbjct: 397 AEQLGYSGRFGPGLPRVSDGSLLFLLHLISKMRPASEGGSRLGIVLNGSPLFTGGAGSGE 456

Query: 333 SRIKEKLLTECNLHTIVRLPNGVFNPYTGIKTNLLFFTKGTPTKQ 377
           S I+  +L    +  I+ LP  +F   TGI T +   +   P  +
Sbjct: 457 SEIRRYVLENDLVEAIIALPTDMFY-NTGISTYIWILSNRKPASR 500