Pairwise Alignments

Query, 489 a.a., Type I restriction enzyme EcoEI M protein from Pseudomonas putida KT2440

Subject, 567 a.a., N-6 DNA methylase (RefSeq) from Shewanella sp. ANA-3

 Score = 69.3 bits (168), Expect = 3e-16
 Identities = 97/375 (25%), Positives = 157/375 (41%), Gaps = 52/375 (13%)

Query: 105 VRSVFEDAYNYMKSGQL-LRQVINKIQEGVDFNRAQ--ERHEFGNLYEQLLRD--LQNAG 159
           ++ V    Y  +K  Q  L ++IN I   + FN      +   G++YE  L    L    
Sbjct: 153 LKGVLNKHYASLKIDQAKLNELINLIAT-IPFNHKSLNSKDILGHIYEYFLGQFALAEGK 211

Query: 160 NAGEFYTPRPVTEFMVRMVDPKLAEKVMDPACGTGGFLTCAIEHKRRRYVKTAEDERT-- 217
             G+FYTP  +   +V M++P    +V DPA G+GGF   + +   RR  +   D  T  
Sbjct: 212 KGGQFYTPASIVSLIVEMIEP-FEGRVYDPAMGSGGFFVQSEKFIERRANQKEIDPLTQK 270

Query: 218 LQASIFGVEKKPLPHLLATTNMILHGIEVPSQIRHDNTLSKPLISWGPSERVHCIVANPP 277
            + SI+G E       LA  NM + G++        +T +       P  R   I+ANPP
Sbjct: 271 QRISIYGQEYNYTTWQLAAMNMAIRGLDYDFGKEPASTYTN---DQHPDLRADFIMANPP 327

Query: 278 FGGME-EDGIETNFPA-AFRTRETADLFLVLIMQL---LKDGGRAAVVLPDGFLF----G 328
           F   E   G++ N P   + T  + +     +  +   L   G  A++L +G +      
Sbjct: 328 FNMKEWNTGVDDNDPRWVYGTPPSGNANFAWMQHMLYHLAPDGSQALLLANGSMSSTTNN 387

Query: 329 EG-IKSRIKEKLLTECNLHTIVRLPNGVFNPYTGIKTNLLFFTKGTPTK----------- 376
           EG I++ + E  L EC    +V LP  +F   T I   + F  K    +           
Sbjct: 388 EGEIRAALVENDLVEC----MVALPGQLFT-NTQIPACIWFLAKNKKARTDKSGRKLRDR 442

Query: 377 --QVWFYEHQYPAGVKNYSKTRPMR------IEEFA-VEEAW-WGSEADGFAARAENAFA 426
             +V F +    A    Y K R +R      I++ A +  AW  G+E +G A   +  F 
Sbjct: 443 KGEVLFID----ARNLGYMKDRVLRDFTQDDIQKVADLYHAWKTGAEVNGIAYEDQAGFC 498

Query: 427 WQVSVEELQARNWNL 441
              ++EE++  ++ L
Sbjct: 499 KSATLEEIKKHDFVL 513