Pairwise Alignments

Query, 787 a.a., Type I restriction enzyme EcoAI R protein from Pseudomonas putida KT2440

Subject, 994 a.a., Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) from Xanthomonas campestris pv. campestris strain 8004

 Score = 53.9 bits (128), Expect = 4e-11
 Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 29/210 (13%)

Query: 165 MPRYYQMNAINRTVEAVARGQDRVLLVMATGTGKTYTAFQIIWRLWKSKQKKRILFLADR 224
           M R YQ+ A+   VE + +      +   TG+GKT T+F+    L  +   ++ LF+ DR
Sbjct: 247 MMRPYQIYAVKNIVECIDKNLGNGYIWHTTGSGKTLTSFKASTLLKANPAIEKCLFVVDR 306

Query: 225 NILVDQTKNNDFKPFGQAMTK-------IARRQI--DTSYEIYLSLYQ----AVTGAEEE 271
             L  QT+  +F  F +   +       + RR +  D + ++ ++  Q    A+  A  +
Sbjct: 307 KDLDRQTR-EEFNRFQEGCVEENTNTESMVRRLVSDDAADKVIVTTIQKLGRALDPARAD 365

Query: 272 MNVYKQFSRDFFDLIVIDECHRGSAAEDSAWREILGYFSNATHVGLTATP---------- 321
              + +  RD   + + DECHR    E+   + I  +F  A   G T TP          
Sbjct: 366 YRQHLEPLRDQRMVFIFDECHRSQFGENH--QAIKEFFPKAQLFGFTGTPIFEDNASYRR 423

Query: 322 ---KETKEVSSITYFGEPVYSYTLKQGIED 348
               E    ++   F + ++ YT+   IED
Sbjct: 424 IEGDEQTLKTTEDLFQQSLHEYTITHAIED 453