Pairwise Alignments

Query, 787 a.a., Type I restriction enzyme EcoAI R protein from Pseudomonas putida KT2440

Subject, 594 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

 Score = 72.4 bits (176), Expect = 7e-17
 Identities = 93/422 (22%), Positives = 172/422 (40%), Gaps = 74/422 (17%)

Query: 167 RYYQMNAINRTVEAVARGQDRVLLVMATGTGKTYTAFQIIWRLWKSKQKKRILFLADRNI 226
           R YQ +++   V    +     ++V+ TG GK+    ++  RL +     R+L LA    
Sbjct: 5   RPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELA-RLARG----RVLVLAHVKE 59

Query: 227 LVDQTKNNDFKPFGQAMTK------IARRQIDTSYEIYLSLYQAVTGAEEEMNVYKQFSR 280
           LV+Q   N  K  G  +T       + R++ D    ++ S+   V    E  N       
Sbjct: 60  LVEQ---NHAKYEGYGLTGAIFSAGLGRKETDQQV-VFASVQSVVRNLSEFQNQ------ 109

Query: 281 DFFDLIVIDECHRGSAAEDSAWREILGYFSNATH----VGLTATP-------------KE 323
             F L+VIDECHR    ++S++++++ +          +GLTATP             + 
Sbjct: 110 --FSLLVIDECHRVPDDKNSSYQKVITHLLELNPGMKVLGLTATPYRLGMGWIYQYHTRG 167

Query: 324 TKEVSSITYFGEPVYSYTLKQGIEDGFLAPYKVVRID-FDKDLQGWRPPKGMLDKNGELI 382
                   +F + ++   +   +++GFL P +++       D    +P      +  EL 
Sbjct: 168 LVRSEEPRFFRDCIFELPIHYLLDEGFLTPAQLIDTPVMSYDFSQLKPANTGRYRESEL- 226

Query: 383 EDRIYNLKDMDRTLVIETRTQLVAQKVTEFLKASDPFQKTIVFCDDINHAERMRQALVNL 442
                        LVIE   +   Q V + ++ +   Q  ++F   + HAE + + L   
Sbjct: 227 ------------DLVIEQSQRATPQIVAQIIELAKARQGVMIFAATVRHAEEIYRLLPT- 273

Query: 443 NPERVAENRKYVMRITGDDQEGKAELDNFINPEERYPV-IATTSKLMTTGVDAQTCKLIV 501
                    ++   + GD      E D  I   ++  +       ++TTG DA    LI 
Sbjct: 274 ---------EHAALVIGDTPT--PERDRIIQAFKQQQIKFLVNVSVLTTGFDAPHVDLIA 322

Query: 502 LDQHIKSMTEFKQIIGRGTRINEDFGKYWFTIMDFK-KATELF----ADPAFDGDPVVVY 556
           + +  +S++ ++QI+GRG R+    GK    ++D+     +L+     DP  D D  ++ 
Sbjct: 323 ILRPTESVSLYQQIVGRGLRLAA--GKSDCLVLDYAGNQYDLYQPEVGDPKPDSDSEIIT 380

Query: 557 AP 558
            P
Sbjct: 381 IP 382