Pairwise Alignments

Query, 787 a.a., Type I restriction enzyme EcoAI R protein from Pseudomonas putida KT2440

Subject, 588 a.a., DNA damage response helicase (yejH or radD) (from data) from Shewanella amazonensis SB2B

 Score = 56.6 bits (135), Expect = 4e-12
 Identities = 90/400 (22%), Positives = 148/400 (37%), Gaps = 80/400 (20%)

Query: 167 RYYQMNAINRTVEAVARGQDRVLLVMATGTGKTYTAFQIIWRLWKSKQKKRILFLADRNI 226
           R YQ +AI  T+      ++  LLV+ TG GK+    ++  RL     K R+L L     
Sbjct: 16  RDYQQDAIEATLAHFRTSRESALLVLPTGAGKSLVIAELA-RL----AKGRVLVLTHVKE 70

Query: 227 LVDQTKNN-DFKPFGQAMTKIARRQIDTSYEIYLSLYQAVTGAEEEMNVYKQFSRDFFDL 285
           LV Q     D      ++      + D+  +        V G +        F    F L
Sbjct: 71  LVAQNAQKVDALAGNASIFSAGLGEKDSGGK------TVVAGIQSAAVNVAAFDEP-FSL 123

Query: 286 IVIDECHRGSAAEDSAWREILGYFSNATH----VGLTATP------------------KE 323
           ++IDECHR S  E+S +R++             +GLTATP                    
Sbjct: 124 VIIDECHRVSLDENSQYRQVFSQLREKNPDLLLLGLTATPYRLGEGAIYKRHVRGHVGNP 183

Query: 324 TKEVSSITYFGEPVYSYTLKQG------IEDGFLAPYKVVRIDFDKDLQGWRPPKGMLDK 377
            K V  +  F  P+ S  +KQG      + DG  A Y    +   +D             
Sbjct: 184 DKGVFDVCIFELPIRS-LIKQGYLTEPLLLDGLAAQYNFAALKASEDA------------ 230

Query: 378 NGELIEDRIYNLKDMDRTLVIETRTQLVAQKVTEFLKASDPFQKTIVFCDDINHAERMRQ 437
                     + ++ +   +++T T+     + +    +      I+F   + HA+ +  
Sbjct: 231 ----------DYQEAEVQAILDTSTRATTTIMGQLKALAQQRLGVIIFAATVRHAKEIMA 280

Query: 438 ALVNLNPERVAENRKYVMRITGDDQEGKAELDNFINPEERYPV-IATTSKLMTTGVDAQT 496
            L            +    IT D      E DN I   +   +       ++TTG DA  
Sbjct: 281 LL-----------DESAALITADTP--GPERDNIITAFKAQELKFLVNVAVLTTGFDAPH 327

Query: 497 CKLIVLDQHIKSMTEFKQIIGRGTRINEDFGKYWFTIMDF 536
             LI + +   S++ F+Q++GRG R+    GK    I+D+
Sbjct: 328 VDLIAILRPTASVSLFQQMVGRGLRLFP--GKAECLILDY 365