Pairwise Alignments

Query, 557 a.a., factor used in recombination and DNA repair from Pseudomonas putida KT2440

Subject, 554 a.a., recombination and repair protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  493 bits (1268), Expect = e-143
 Identities = 266/552 (48%), Positives = 350/552 (63%), Gaps = 1/552 (0%)

Query: 1   MLVHLSIHNYAIVEHLDLEIARGMSVITGETGAGKSIMLDALGLALGDRADSGVVRPGTD 60
           ML  LSI+N+AIV  L+L+   GM+ ITGETGAGKSI +DALGL LG+RAD+G VRPG  
Sbjct: 1   MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADAGAVRPGAS 60

Query: 61  KADILATFDLVDIPEAHTWLAERDLDNEGLCILRRVITAEGRSRGYINGTPCPLGDLKAL 120
           K ++ A F L D+P A  WL + DL+ +  CILRR IT++GRSR YING P PL  LK+L
Sbjct: 61  KTEVSARFSLDDVPLARRWLEDNDLELDDECILRRTITSDGRSRAYINGNPVPLSQLKSL 120

Query: 121 GELLIDIHSQHEHQSLLKTDTHRRLLDEYAGAVDLARQVQLAAKRWNQTRLELERLSNSG 180
           G+ L+ IH QH H +LLK +    LLD YA    L   V  A +R  Q   EL +L  S 
Sbjct: 121 GQYLVGIHGQHAHHALLKNEHQLTLLDSYANHRMLQESVASAYQRCRQIEAELRQLEQSQ 180

Query: 181 DEQRARHQLLSYQLEELDNLGLGEHELEQLEQEHKNLTSAEALFGICRQVIDQCSESDSG 240
            E+ AR QLL YQ+EELD   L E E EQ+E EHK L +  AL   C+  +   SESD G
Sbjct: 181 QERIARKQLLQYQVEELDEFALMEGEFEQIEAEHKRLANGTALIEDCQHTLSLLSESDEG 240

Query: 241 NVLSALTSSLNRLGAATNSPKALSEAANLIASAQIQVEEAVGELNRFLDNFDADPIRLQA 300
           N+ S L  +L+      +    L+   N++  A IQV+E+  EL R+L N + DP     
Sbjct: 241 NIESLLNRALSLAATLESLDPTLAPIGNMLNDALIQVQESSSELGRYLSNLELDPEHFAY 300

Query: 301 LEERLDTIYTLARKHRVHPTELPHLQQQLMEELEGLNASDESIERLGEELAAYAQHYKEK 360
           LEERL    TLARKH V   +L    Q+L  EL GL++ +  ++ L +++    + Y   
Sbjct: 301 LEERLSKAMTLARKHHVAADKLAAHHQELARELAGLDSDEAQLDELKQQVQTSREAYLSH 360

Query: 361 ARELSGLRQQAAQQLAGAVEQEIQRLGMPGGRFCIELTANEGTELSPHGLEQIELLVSAN 420
           A++LS  R + A++L   V   IQ L MP G+F IE+  N+   +S +G + +E LV+ N
Sbjct: 361 AQKLSQSRLRYAKELDKQVTASIQELNMPKGKFTIEVNFNDKV-MSANGSDSVEFLVTTN 419

Query: 421 PGQPLKALAKVASGGELSRISLAIQVITAQTSRIPTLVFDEVDVGIGGPTAEIVGQLLRR 480
           PGQPL  LAKVASGGELSRI L IQVITA+    PTL+FDEVDVGI GPTA +VG++LR 
Sbjct: 420 PGQPLSPLAKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRA 479

Query: 481 LGERGQVLTVTHLPQVAAQGHHHLFVHKVRNSDTTHTAVASLGKRERVEEVARMLGGIDL 540
           LGE  QV  VTHLPQVA  GH H+FV+K      T T++  L K  R++E+AR+LGG  +
Sbjct: 480 LGEATQVFCVTHLPQVAGNGHQHMFVNKSTKGGQTETSMKPLDKDARIQELARLLGGDTI 539

Query: 541 TKESLAHARKMV 552
           T+ +LA+AR+++
Sbjct: 540 TENTLANARELL 551