Pairwise Alignments

Query, 557 a.a., factor used in recombination and DNA repair from Pseudomonas putida KT2440

Subject, 548 a.a., DNA repair protein RecN from Phaeobacter inhibens DSM 17395

 Score =  311 bits (797), Expect = 4e-89
 Identities = 203/555 (36%), Positives = 295/555 (53%), Gaps = 12/555 (2%)

Query: 1   MLVHLSIHNYAIVEHLDLEIARGMSVITGETGAGKSIMLDALGLALGDRADSGVVRPGTD 60
           ML  L I +  I++HL+L    G++V+TGETGAGKSI+LD+LG  LG R  + +VR G  
Sbjct: 1   MLRALDIRDILIIDHLELNFQPGLNVLTGETGAGKSILLDSLGFVLGWRGRAELVRQGAK 60

Query: 61  KADILATFDLVDIPEAHTWLAERDLDNEGLCILRRVITAEGRSRGYINGTPCPLGDLKAL 120
           + ++LA FDL     AH  LAE  L      +LRRV TAEGR   ++N   C    L+AL
Sbjct: 61  QGEVLAEFDLTPEHPAHAVLAEAGLPGGDTLLLRRVNTAEGRKTAWVNDRRCSGEVLRAL 120

Query: 121 GELLIDIHSQHEHQSLLKTDTHRRLLDEYAGAVDLARQVQLAAKRWNQTRLELERLSNSG 180
            + L+++H QH+ + LL    HR +LDE+AG  D+   V+      ++ R  +E   ++ 
Sbjct: 121 SDTLLELHGQHDDRGLLNPRGHRAMLDEFAGLGDMLASVRDLWATASRARKAVEETRSAL 180

Query: 181 DEQRARHQLLSYQLEELDNLGLGEHELEQLEQEHKNLTSAEALFGICRQ---VIDQCSES 237
           +  RA    L + + ELD L     E   L+Q  + + SAE + G  ++   ++   +E+
Sbjct: 181 EAIRAEEDFLRHAVAELDALDPQPGEDAALDQRRREMQSAERIRGDIQRAQGILADGAEA 240

Query: 238 DSGNVLSALTSSLNRLGAATNSPKALSEAANLIASAQIQVEEAVGELNRFLDNFDADPIR 297
             G+    L       G +  +  AL      +  A I++ EA   + R LD  + +P  
Sbjct: 241 ALGDAQRWLE------GVSDQAENALDAPIAALLRAMIELGEAQDGVARVLDGLEFNPGE 294

Query: 298 LQALEERLDTIYTLARKHRVHPTELPHLQQQLMEELEGLNASDESIERLGEELAAYAQHY 357
           L+  EERL  I  LARKH V P +L    + L E+L  ++A D+ +      LA     Y
Sbjct: 295 LEESEERLFAIRALARKHDVLPDDLGGYAETLREKLAAVDAGDQDLADQEAALAEAEAAY 354

Query: 358 KEKARELSGLRQQAAQQLAGAVEQEIQRLGMPGGRFCIELTANEGTELSPHGLEQIELLV 417
              A +LS  R++ A  L  AV  E+  L M    F   L+     E  P G + +   V
Sbjct: 355 AGAAAQLSAARRETAAALDTAVMAELAPLKMERAVFETRLS---DAEPGPEGKDAVAFTV 411

Query: 418 SANPGQPLKALAKVASGGELSRISLAIQVITAQTSRIPTLVFDEVDVGIGGPTAEIVGQL 477
           + NPG P   L K+ASGGELSR  LA++V     +   T++FDE+D G+GG TA+ VG+ 
Sbjct: 412 ATNPGAPAGPLNKIASGGELSRFLLALKVCLRGETGNQTMIFDEIDRGVGGATADAVGRR 471

Query: 478 LRRLGERGQVLTVTHLPQVAAQGHHHLFVHKVRNSDTTHTAVASLGKRERVEEVARMLGG 537
           L+ L E  QVL VTH PQVAAQG HH  V K      T + V  L + ERV+E+ARM+ G
Sbjct: 472 LKSLAEGSQVLVVTHSPQVAAQGAHHWRVQKQVIDGQTLSQVVPLDEGERVDELARMVSG 531

Query: 538 IDLTKESLAHARKMV 552
             +T E+ A A+ ++
Sbjct: 532 DTITPEARAAAKALL 546