Pairwise Alignments

Query, 557 a.a., factor used in recombination and DNA repair from Pseudomonas putida KT2440

Subject, 587 a.a., Probable DNA repair protein RecN (recombination protein N) from Mycobacterium tuberculosis H37Rv

 Score =  228 bits (582), Expect = 4e-64
 Identities = 177/584 (30%), Positives = 263/584 (45%), Gaps = 38/584 (6%)

Query: 1   MLVHLSIHNYAIVEHLDLEIARGMSVITGETGAGKSIMLDALGLALGDRADSGVVRPGTD 60
           +L  L I +   +     E  RG +V+TGETG GK++++  L L  G RAD+  VR G D
Sbjct: 1   VLTELRIESLGAISVATAEFDRGFTVLTGETGTGKTMVVTGLHLLGGARADATRVRSGAD 60

Query: 61  KADILATFDLVDIPEAHTWLAERDLDN-------EGLCILRRVITAEGRSRGYINGTPCP 113
           +A +   F   D+ +A     +  LD+       +G  I  R I+ +G SR Y+ G   P
Sbjct: 61  RAVVEGRFTTTDLDDATVAGLQAVLDSSGAERDEDGSVIALRSISRDGPSRAYLGGRGVP 120

Query: 114 LGDLKALGELLIDIHSQHEHQSLLKTDTHRRLLDEYAGAVDLARQVQLAAKRWNQTRLEL 173
              L      L+ +H Q++   L++ D  R  LD +A A +  ++ +     W   R +L
Sbjct: 121 AKSLSGFTNELLTLHGQNDQLRLMRPDEQRGALDRFAAAGEAVQRYRKLRDAWLTARRDL 180

Query: 174 ERLSNSGDEQRARHQLLSYQLEELDNLGLGEHELEQLEQEHKNLTSAEALFGICRQV-ID 232
               N   E       L + L E+D +     E   L  +   L+  + L          
Sbjct: 181 VDRRNRARELAQEADRLKFALNEIDTVDPQPGEDVALVADIARLSELDTLREAATTARAT 240

Query: 233 QCSESDSGNVLSALTSSLNRLGAATNSPK--ALSEAANLIASAQIQVEEAVGELNRFLDN 290
            C   D+         SL R  AA  S    AL   A  +  A   V +AV EL  +LD 
Sbjct: 241 LCGTPDADAFDRGAVDSLGRARAALQSSDDAALRGLAEQVGEALTVVVDAVAELGAYLDE 300

Query: 291 FDADPIRLQALEERLDTIYTLARKHRVHPTELPHLQQQLMEELEGLNASDESIERLGEEL 350
             AD   L A   R   + TL RK+      +     +    L  L+ S+E +  L    
Sbjct: 301 LPADASALDAKLARQAQLRTLTRKYAADIDGVLRWADEARARLAQLDVSEEGLAALERRT 360

Query: 351 AAYAQHYKEKARELSGLRQQAAQQLAGAVEQEIQRLGMPGGRFCIELTANEGTELSPHG- 409
              A    + A +LS +R++AA++LA  V  E+  L M    F I +T    TEL+ HG 
Sbjct: 361 GELAHELGQAAVDLSTIRRKAAKRLAKEVSAELSALAMADAEFTIGVT----TELADHGD 416

Query: 410 ------------------LEQIELLVSANPGQPLKALAKVASGGELSRISLAIQVITAQT 451
                             ++ +E    A+ G  +  LAK ASGGELSR+ L+++V+ A +
Sbjct: 417 PVALALASGELARAGADGVDAVEFGFVAHRGMTVLPLAKSASGGELSRVMLSLEVVLATS 476

Query: 452 SRIP---TLVFDEVDVGIGGPTAEIVGQLLRRLGERGQVLTVTHLPQVAAQGHHHLFVHK 508
            +     T+VFDE+D G+GG  A  +G+ L RL    QV+ VTHLPQVAA    HL V +
Sbjct: 477 RKQAAGTTMVFDEIDAGVGGWAAVQIGRRLARLARTHQVIVVTHLPQVAAYADVHLMVQR 536

Query: 509 VRNSDTTHTAVASLGKRERVEEVARMLGGIDLTKESLAHARKMV 552
                   + V  L   +RV E+ARML G+  +    AHAR+++
Sbjct: 537 TGRDGA--SGVRRLTSEDRVAELARMLAGLGDSDSGRAHARELL 578