Pairwise Alignments

Query, 557 a.a., factor used in recombination and DNA repair from Pseudomonas putida KT2440

Subject, 550 a.a., SMC domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  214 bits (545), Expect = 7e-60
 Identities = 181/559 (32%), Positives = 266/559 (47%), Gaps = 44/559 (7%)

Query: 1   MLVHLSIHNYAIVEHLDLEIARGMSVITGETGAGKSIMLDALGLALGDRADSGVVRPGTD 60
           ML +L I + A++E ++L+ A G++ +TGETGAGKS +L AL   +GDR  S +VRPG +
Sbjct: 1   MLEYLRIRDLALIEDMELDFAPGLNALTGETGAGKSFILKALNFLIGDRLTSDMVRPGKE 60

Query: 61  KADILATFDLVDIPEAHTWLAERDLDNEGLCILRRVITAE-GRSRGYINGTPCPLGDLKA 119
           KA + A F L D                G  +LRR +TA+ GRSR +IN        ++ 
Sbjct: 61  KAHVEALFALPD----------------GDMVLRRELTADTGRSRLFINDRLSSQDAVRD 104

Query: 120 LGELLIDIHSQHEHQSLLKTDTHRRLLDEYAGAVDLARQVQLAAKRWNQTRLELERLSNS 179
           +   L+   SQH  Q LL+     RLLDE+    DL      A K   +     E L+  
Sbjct: 105 MRASLVVHTSQHGQQKLLQPAFQARLLDEFLNRPDLLAARDDALKGLREVAARREELAAR 164

Query: 180 GDEQRARHQLLSYQLEELDNLGLGEHELEQLEQEHKNLTSAEALFGICRQVIDQCSESDS 239
                 R  +L +Q  E+D +     E E+LE+  + L    +      + +      D 
Sbjct: 165 ARSLEDRRDVLEFQQREIDKVAPEAGEEERLEERRRALRDVASAQQAQERALAVLRGEDG 224

Query: 240 GNVLSAL------TSSLNRL------GAATNSPKALSEAANLIASAQIQVEEAVGELNRF 287
             V  AL         L RL       AA  S  A   AA++   +  +  + + +L R 
Sbjct: 225 PGVAEALGLLERTLDGLARLHGADSGDAAPGSGDASGWAADVTTISAFR--QGLSDLERR 282

Query: 288 LDNFDA-------DPIRLQALEERLDTIYTLARKHRVHPTELPHLQQQLMEELEGLNASD 340
           L    A       D + ++A+E+RL  +  L RK R    E+  L++++ E L  L+A  
Sbjct: 283 LRRRPAPAASDGDDDMDVEAIEKRLYELAQLKRKLRRTLDEIVDLRREIEENLSFLDACR 342

Query: 341 ESIERLGEELAAYAQHYKEKARELSGLRQQAAQQLAGAVEQEIQRLGMPGG-RFCIELTA 399
             +  L  E  A  +       EL+  RQ+AA +LA A+E E+  LG     R   + T 
Sbjct: 343 LDLRTLEREEEARKEQLCAVLAELNPARQEAATRLAQALEGELAGLGFSEHVRVTFDFTP 402

Query: 400 NEGTELSPHGLE-QIELLVSANPGQPLKALAKVASGGELSRISLAIQVITAQTSRIPTLV 458
           +E     P  +E +  L+   NPGQP + L ++ASGGELSR  LA+  + A+     TL+
Sbjct: 403 HEPW---PGCVEDRARLMWVPNPGQPPQPLDRIASGGELSRFLLAVVGLMAR-DETATLI 458

Query: 459 FDEVDVGIGGPTAEIVGQLLRRLGERGQVLTVTHLPQVAAQGHHHLFVHKVRNSDTTHTA 518
           FDEVD G+GG T   V + L  L  R QV+ +TH PQ+AA+   H  V K    + T T 
Sbjct: 459 FDEVDSGVGGLTLNRVSERLAALAGRRQVILITHWPQLAARAGRHFQVSKEVADNATFTL 518

Query: 519 VASLGKRERVEEVARMLGG 537
              L   +  +E+ARM GG
Sbjct: 519 CRRLDGEDIRKELARMAGG 537