Pairwise Alignments

Query, 557 a.a., factor used in recombination and DNA repair from Pseudomonas putida KT2440

Subject, 553 a.a., DNA repair protein RecN (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  305 bits (782), Expect = 2e-87
 Identities = 203/554 (36%), Positives = 289/554 (52%), Gaps = 6/554 (1%)

Query: 1   MLVHLSIHNYAIVEHLDLEIARGMSVITGETGAGKSIMLDALGLALGDRADSGVVRPGTD 60
           ML  L I +  I++HL L+   G++V+TGETGAGKSI+LDALG  LG R  + +VR G  
Sbjct: 1   MLARLDIRDILIIDHLVLDFRAGLNVLTGETGAGKSILLDALGFVLGWRGRADLVRQGAA 60

Query: 61  KADILATFDLV-DIPEAHTWLAERDLDNEGLCILRRVITAEGRSRGYINGTPCPLGDLKA 119
           + ++ A FDL  D P      A    D EG  ILRRV T EGR   Y+N   C    L+A
Sbjct: 61  QGEVTAVFDLAPDHPAFAVLRAAGFPDPEGELILRRVNTGEGRKSAYVNDRACSGTVLRA 120

Query: 120 LGELLIDIHSQHEHQSLLKTDTHRRLLDEYAGAVDLARQVQLAAKRWNQTRLELERLSNS 179
           L ++L+++H Q + + LL    HR LLD++ G   L R+V  A +     +  LE     
Sbjct: 121 LSDVLVELHGQQDDRGLLDPKGHRALLDDFGGHDRLRREVASAWRARAAAQSALETARAE 180

Query: 180 GDEQRARHQLLSYQLEELDNLGLGEHELEQLEQEHKNLTSAEALFGICRQVIDQCSESDS 239
                A  + L + + ELD L     E  +L+   + + +AE +     + +      D 
Sbjct: 181 VAAVAADEEFLRHAVGELDALDPQPGEEAELDIARRRMQAAEKIRADVARALQALIAPDG 240

Query: 240 GNVLSALTSSLNRLGAATNSPKALSEAANLIASAQIQVEEAVGELNRFLDNFDADPIRLQ 299
           G     + ++    G A  +  AL      ++ A +++ EA     R LD    DP+ L+
Sbjct: 241 GAESLVVDATRWLEGVAAEADGALDAPIGALSRALVELGEASDGTERALDGLGVDPLELE 300

Query: 300 ALEERLDTIYTLARKHRVHPTELPHLQQQLMEELEGLNASDESIERLGEELAAYAQHYKE 359
             EERL  +  LARKH V   +L      L   L  L+A  + ++ L + LA     Y  
Sbjct: 301 RTEERLFALRGLARKHGVAADDLGGFADTLRARLNTLDAGADRLQGLEQALAEAEAAYAA 360

Query: 360 KARELSGLRQQAAQQLAGAVEQEIQRLGMPGGRFCIELTANEGTELSPHGLEQIELLVSA 419
            A  L+  R+ AA +L  A+  E+  L M    F  E+T        P G +Q+   V+ 
Sbjct: 361 AAGALTAARRAAAGRLDAAMADELAPLKMERAVFGTEITP---AAPGPDGADQVTFRVAT 417

Query: 420 NPGQPLKALAKVASGGELSRISLAIQV-ITAQTSRIPTLVFDEVDVGIGGPTAEIVGQLL 478
           NPG P  AL K+ASGGELSR  LA++V +TA T  + TL+FDE+D G+GG TA+ VG+ L
Sbjct: 418 NPGAPAGALNKIASGGELSRFLLALKVCLTAGTEGL-TLIFDEIDRGVGGATADAVGRRL 476

Query: 479 RRLGERGQVLTVTHLPQVAAQGHHHLFVHKVRNSDTTHTAVASLGKRERVEEVARMLGGI 538
           + L E GQVL VTH PQVAA G HH  V K   +D T + V  L   +RV+E+ARM+ G 
Sbjct: 477 QSLAEAGQVLVVTHSPQVAALGAHHWRVEKTVQADVTLSRVVPLAPPDRVDEIARMMSGD 536

Query: 539 DLTKESLAHARKMV 552
            +T  + A AR ++
Sbjct: 537 VVTDAARAAARALL 550