Pairwise Alignments

Query, 557 a.a., factor used in recombination and DNA repair from Pseudomonas putida KT2440

Subject, 555 a.a., DNA repair protein recN (Recombination protein N) (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  327 bits (838), Expect = 7e-94
 Identities = 202/556 (36%), Positives = 315/556 (56%), Gaps = 9/556 (1%)

Query: 1   MLVHLSIHNYAIVEHLDLEIARGMSVITGETGAGKSIMLDALGLALGDRADSGVVRPGTD 60
           ML  L I NYA++E LD+    G SVITGETGAGKSI+L A+GL LG RAD   +R G  
Sbjct: 1   MLRSLYIQNYALIEKLDIGFETGFSVITGETGAGKSIILGAIGLLLGQRADVKAIRRGAS 60

Query: 61  KADILATFDLVDIPEAHTWLAERDLD-NEGLCILRRVITAEGRSRGYINGTPCPLGDLKA 119
           K  I A FD +       +  E +L+ ++  CILRR + A G+SR +IN TP  L  +K 
Sbjct: 61  KCIIEARFD-ISAYGMRPFFEENELEYDDEECILRREVQASGKSRAFINDTPASLAQVKE 119

Query: 120 LGELLIDIHSQHEHQSLLKTDTHRRLLDEYAGAVDLARQVQLAAKRWNQTRLELERLSNS 179
           LGE LID+HSQH++  L K      +LD  A   D   +  L    W     EL  L+  
Sbjct: 120 LGEQLIDVHSQHQNLLLNKEGFQLNVLDILAHNDDALEKYHLLYNEWKLLDRELSELTAL 179

Query: 180 GDEQRARHQLLSYQLEELDNLGLGEHELEQLEQEHKNLTSAEAL-FGICRQVIDQCSESD 238
            ++ R     L +QLE+L+   L E E  +LEQE + L+ AE +  G+ R  I+Q   SD
Sbjct: 180 AEQSRTDEDYLRFQLEQLEEAHLVEGEQSELEQEAETLSHAEEIKAGLYR--IEQSFFSD 237

Query: 239 SGNVLSALTSSLNRLGAATNSPKALSEAANLIASAQIQVEEAVGELNRFLDNFDADPIRL 298
            G +LS L  +LN L       +   E ++ + SA I++++   E++   ++ + +P RL
Sbjct: 238 EGGLLSFLKDNLNTLNNLRKVYQPAGELSDRMESAYIELKDISQEVSAQGESIEFNPTRL 297

Query: 299 QALEERLDTIYTLARKHRVHP-TELPHLQQQLMEELEGLNASDESIERLGEELAAYAQHY 357
             + +RL+ IY+L +KHRV    EL  L  Q   +L  + + D+ I  L     A  +  
Sbjct: 298 DEVNDRLNLIYSLQQKHRVQTLEELMALADQYRSKLSEITSYDDRIAELTARKEAQYERV 357

Query: 358 KEKARELSGLRQQAAQQLAGAVEQEIQRLGMPGGRFCIELTANEGTELSPHGLEQIELLV 417
           K++A  L+  R  AA+++   + + +  LGMP  RF +E+   +  E    G + +  L 
Sbjct: 358 KKQATVLTKARAAAAREVEKQLAERLVPLGMPNVRFQVEMGLKK--EPGIQGEDTVNFLF 415

Query: 418 SANPGQPLKALAKVASGGELSRISLAIQVITAQTSRIPTLVFDEVDVGIGGPTAEIVGQL 477
           SAN    L++++ VASGGE++R+ L+I+ + A   ++PT+VFDE+D G+ G  A+ +  +
Sbjct: 416 SANKNGTLQSISSVASGGEIARVMLSIKAMIAGAVKLPTIVFDEIDTGVSGEIADRMADM 475

Query: 478 LRRLGE-RGQVLTVTHLPQVAAQGHHHLFVHKVRNSDTTHTAVASLGKRERVEEVARMLG 536
           ++ +G+   QV+++THLPQ+AA+G  H  V+K  +   T++ +  L   ERVEE+A ML 
Sbjct: 476 MQEMGDCNRQVISITHLPQIAARGRAHYKVYKKDSDTETNSHIRRLTDEERVEEIAHMLS 535

Query: 537 GIDLTKESLAHARKMV 552
           G  LT+ +L++A+ ++
Sbjct: 536 GATLTEAALSNAKALL 551