Pairwise Alignments

Query, 378 a.a., Carbamoyl-phosphate synthase small chain from Pseudomonas putida KT2440

Subject, 391 a.a., carbamoyl phosphate synthase small subunit from Synechococcus elongatus PCC 7942

 Score =  343 bits (879), Expect = 6e-99
 Identities = 188/377 (49%), Positives = 237/377 (62%), Gaps = 12/377 (3%)

Query: 5   AILALADGSIFRGEAIGADGQTVGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHIGNTG 64
           A+L LADGS+F G A GA G  +GEVVFNT MTGYQE+LTDPSY  QIV+ TYP +GNTG
Sbjct: 19  ALLVLADGSVFHGYACGAAGTVIGEVVFNTGMTGYQEVLTDPSYCGQIVSFTYPELGNTG 78

Query: 65  TTPEDAESSRVWSAGLVIRDLPLLASNWRNTQSLPEYLKANNVVAIAGIDTRRLTRILRE 124
             PED ES+R   +GL+ R++    SNWR  +SLP+YL+ +N+V I GIDTR LT+ LR 
Sbjct: 79  VNPEDEESARPQVSGLIARNVARRHSNWRADRSLPDYLQQHNIVGIYGIDTRALTQHLRS 138

Query: 125 KGAQNGCILAGDNISEEAAIAAARGFPGLKGMDLAKVVSTKERYEWR---SSVWELKTDS 181
            GA NG I +   +  E   A  +  P ++G++L   V+T   YEW+   S  WE     
Sbjct: 139 TGAMNGGI-STTILDPEELWAEVKAAPSMEGLNLVDQVTTDRPYEWQTPTSQTWEF--IE 195

Query: 182 HPTIDAADLPYHVVAFDYGVKLNILRMLVARGCRVTVVPAQTPASEVLALNPDGVFLSNG 241
            PT ++      VVA D+GVK NILR L + GCRV VVPA TP  E+L   PDGVFLSNG
Sbjct: 196 GPTTESLT----VVAIDFGVKRNILRRLASYGCRVIVVPADTPIEEILRHEPDGVFLSNG 251

Query: 242 PGDPEPCDYAIQAIKEILETEIPVFGICLGHQLLALASGAKTVKMGHGHHGANHPVQDLD 301
           PGDP      I   + +L+T +P+FGICLGHQ+L LA GA+T K+  GH G NHP     
Sbjct: 252 PGDPATVKNGISTAQALLQTGLPLFGICLGHQILGLALGAQTFKLKFGHRGLNHPCG--L 309

Query: 302 TGVVMITSQNHGFAVDEATLPGNVRAIHKSLFDGTLQGIERTDKSAFSFQGHPEASPGPT 361
           +  V ITSQNHGFA+   +L  +V   H +L D T+ G+       FS Q HPEASPGP 
Sbjct: 310 SQQVEITSQNHGFAIAADSLGPDVEVTHLNLNDRTVAGLRHRHLPVFSVQYHPEASPGPH 369

Query: 362 DVAPLFDRFTDAMAKRR 378
           D   LF++F   M  R+
Sbjct: 370 DSDYLFEQFVALMRDRQ 386