Pairwise Alignments

Query, 1076 a.a., Carbamoyl-phosphate synthase large chain from Pseudomonas putida KT2440

Subject, 1081 a.a., carbamoyl-phosphate synthase large subunit from Methanococcus maripaludis S2

 Score = 1101 bits (2848), Expect = 0.0
 Identities = 566/1069 (52%), Positives = 766/1069 (71%), Gaps = 23/1069 (2%)

Query: 6    KRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGFRVILVNSNPATIMTDPAMAD 65
            KR DIK ++ILG+GPIVIGQA EFD+SG+QACK+L+EEG   ILVNSNPATI TD  +AD
Sbjct: 2    KREDIKKVMILGSGPIVIGQAAEFDFSGSQACKSLKEEGIYTILVNSNPATIQTDTNIAD 61

Query: 66   ATYIEPIKWQSVAKIIEKERPDAVLPTMGGQTALNCALDLERHGVLEKFGVEMIGANADT 125
              Y+EP+  + + KIIEKE+PDA+LPTMGGQT LN A++L + G+LEK GVE++G+    
Sbjct: 62   KVYLEPLNPKILEKIIEKEQPDAILPTMGGQTGLNLAMELSKRGILEKHGVELLGSTESV 121

Query: 126  IDKAEDRSRFDKAMKDIGLECPRSGIAHSMEEANAVLEKLGFPCIIRPSFTMGGTGGGIA 185
            I+ +EDR  F+KAM++I     +S   HS+EEA    ++LG+P I+RP+FT+GGTGGGIA
Sbjct: 122  IETSEDRDLFNKAMEEINQPIAKSAAVHSVEEAIGATKELGYPAIVRPAFTLGGTGGGIA 181

Query: 186  YNREEFEEICTRGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGV 245
             N EE  EI  +GL  S  K++LID+SL+GWKEYE EV+RDK D CI+VC++EN DPMG+
Sbjct: 182  NNEEELIEITKKGLKYSMIKQVLIDQSLLGWKEYEYEVMRDKNDTCIVVCNMENIDPMGI 241

Query: 246  HTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMNP 305
            HTG+SI  AP+QTL+D+ +Q +R+ASL ++R + +E GG NVQF + P     VVIE+NP
Sbjct: 242  HTGESIVTAPSQTLSDEFHQKLRDASLQIIRHLKIE-GGCNVQFAVNPEMTDYVVIEVNP 300

Query: 306  RVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGRTPASFEPSIDYVVTKLPRF 365
            RVSRSSALASKATG+PIAKIAAK+AIG TLDE+QND+T   TPASFEP+IDYVV K+PR+
Sbjct: 301  RVSRSSALASKATGYPIAKIAAKIAIGRTLDEIQNDVTK-ETPASFEPTIDYVVVKIPRW 359

Query: 366  AFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGACGL--DPK-VDLASPE 422
             F+KF   D +L T MKS GE+MAIGR  +E+LQKA+R L++G  G+  D K  + ++ E
Sbjct: 360  PFDKFRTVDKKLGTSMKSTGEIMAIGRNLEEALQKAVRSLDIGRFGIIADGKDKEYSNSE 419

Query: 423  AASILKRELTVPGAERIWYVADAMRSGMTCEEIFNLTGIDMWFLVQMEDLIKEEEKVKTL 482
               IL+        ER++ +A A+  G + + I   TGI+ +F+ +++ +I  +++++ +
Sbjct: 420  IVDILEHATD----ERLFVIAYALDKGWSVDGICERTGINPFFIEKIKKIIDCKKELEVI 475

Query: 483  ALSAID----KDYMLRLKRKGFSDQRLAVLLGITDKNLRRHRHKLEVFPVYKRVDTCAAE 538
            +   +D    K+ +L+ K  GFSD +++ +   T+  +R  R +LEV PVYK VDTCAAE
Sbjct: 476  SRIPVDDEKLKEILLKAKSLGFSDVQISKIFSKTENEIRDLRKRLEVIPVYKMVDTCAAE 535

Query: 539  FATDTAYLYSTYE-----EECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALRE 593
            F   T Y YS YE     E+ E+  S R K++ILG GP RIGQG+EFDY  VHA  AL+E
Sbjct: 536  FEAKTPYYYSAYERYFDEEQNESVSSDRKKVIILGSGPIRIGQGVEFDYSTVHAIFALKE 595

Query: 594  DGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEVCRVEKPKG----VIVHYGGQTP 649
             G E I+VN NPETVSTDYDTSD+LYFEPL  E+++ +   E   G    VIV +GGQT 
Sbjct: 596  LGIEAIIVNNNPETVSTDYDTSDKLYFEPLVYEEIMNIIENENKNGQLLGVIVQFGGQTA 655

Query: 650  LKLARALEEAGVPIIGTSPDAIDRAEDRERFQQMVQRLSLLQPPNATVRSEEEAIRAAGS 709
            + LA  L  +GV I+GTSP +ID AEDR++F  ++++L + Q   AT  SEE+A++    
Sbjct: 656  INLAMKLYNSGVNILGTSPQSIDLAEDRDQFIHVLEKLKIPQADGATAFSEEQALKVVER 715

Query: 710  IGYPLVVRPSYVLGGRAMEIVYELDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAV 769
            IGYP +VRPSYVLGGRAM+IVY  ++LK Y+REAV+VS+D P+L+D FL  A+E+DVDAV
Sbjct: 716  IGYPALVRPSYVLGGRAMQIVYNTEDLKDYMREAVKVSSDHPILIDKFLEEAVEVDVDAV 775

Query: 770  CDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSLSKEVQDEVRVQVKKMALELGVVGLMN 829
            CDG  V IGAIM+HIE+AG+HSGDSAC +PP +LSKEV +++     K+ALELGV+GL+N
Sbjct: 776  CDGESVFIGAIMEHIEEAGIHSGDSACVIPPQTLSKEVIEKIAEHTTKLALELGVIGLLN 835

Query: 830  VQLALQGDKIYVIEVNPRASRTVPFVSKCIGTSLAMIAARVMAGKTLKELGFTQEIIPNF 889
            +Q A++   +Y+IE NPRASRT+P+VSK +G  LA IA   + GK LKE+G+       +
Sbjct: 836  IQYAVKDGVVYIIEANPRASRTIPYVSKSVGVPLAKIATNAIMGKKLKEMGYFGLAKSKY 895

Query: 890  YSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDSFGEAFAKAQMGASEVLPTGGTAFI 949
             SVKEAVFPF K PGVDP+L PEMKSTGE +G+   FG+AF K+Q+ A+  LPT GT FI
Sbjct: 896  VSVKEAVFPFLKLPGVDPVLSPEMKSTGEAIGIDQDFGKAFYKSQLSANMELPTSGTVFI 955

Query: 950  SVRDDDKPQVAGVARDLIALGFEVVATAGTAKVIEAAGLKVRRVNKVTEGRPH-VVDMIK 1008
            SVR+ DK  +  +A+    LGFE+VAT GTA+ +    + VR V K++E   + V+D+++
Sbjct: 956  SVRNRDKDNITKIAKKYHNLGFEIVATRGTARELRLFDIPVREVRKISESMQNSVLDLMQ 1015

Query: 1009 NDEVSLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALK 1057
              EV LIINT+ G ++  D Y IRR A++  I C TT+    A  +A++
Sbjct: 1016 KGEVDLIINTSSGDKAKTDGYFIRRAAVELNIPCMTTLQGAYAAIKAIE 1064