Pairwise Alignments

Query, 637 a.a., integral membrane ATP-dependent zinc metallopeptidase from Pseudomonas putida KT2440

Subject, 632 a.a., FtsH peptidase homologue, chloroplast. Metallo peptidase. MEROPS family M41 from Synechococcus elongatus PCC 7942

 Score =  483 bits (1244), Expect = e-141
 Identities = 277/578 (47%), Positives = 371/578 (64%), Gaps = 12/578 (2%)

Query: 29  NEPQT--LNYSDFIQQVKDGKVERVTVDGYIITGKRTDGDNFKTVRPAITDNG-LIGDLV 85
           +EP T  L+YS  ++ + DG+V+ +  D      +           P    N  LI    
Sbjct: 40  SEPTTVSLDYSGLLKDIADGQVQSIDYDPVQRVARVQLQGRRSAEVPLFNQNPELIETAR 99

Query: 86  DNHVVVEGKQPEQQSIWTQLLVASFPILVIIAVFMFFMRQMQGGAGGKGGPMSFGKSKAR 145
             +V  E    +  S     LV    IL++I   +F +R+    AG     ++FGKS+AR
Sbjct: 100 RYNVPFEVTPTQDNSALAGTLVNLGLILILIVGLVFLLRR---SAGAANQALNFGKSRAR 156

Query: 146 LLSEDQVKTTLADVAGCDEAKEEVGELVEFLRDPGKFQRLGGRIPRGVLMVGPPGTGKTL 205
              E +      DVAG +EAKEE+ E+V FLR   +F  +G RIPRGVL+VGPPGTGKTL
Sbjct: 157 FQMEAKTGVMFEDVAGIEEAKEELQEVVSFLRSSDRFTAVGARIPRGVLLVGPPGTGKTL 216

Query: 206 LAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHR 265
           LAKAIAGEA VPFF++SGS+FVEMFVGVGASRVRD+F +AK+++PCI+FIDEIDAVGR R
Sbjct: 217 LAKAIAGEAGVPFFSMSGSEFVEMFVGVGASRVRDLFRKAKENSPCIVFIDEIDAVGRQR 276

Query: 266 GAGMGGGHDEREQTLNQLLVEMDGFEMNDGIIVIAATNRPDVLDPALLRPGRFDRQVVVG 325
           GAG+GGG+DEREQTLNQLL EMDGFE N G+I+IAATNRPDVLD ALLRPGRFDRQ+ V 
Sbjct: 277 GAGIGGGNDEREQTLNQLLTEMDGFEENSGVIIIAATNRPDVLDSALLRPGRFDRQITVD 336

Query: 326 LPDIRGREQILKVHMRKVPIGENVNPAVIARGTPGFSGADLANLVNEASLFAARSNKRLV 385
           LP   GR  IL+VH R   + E V+   IAR TPGFSGA+LANL+NEA++  AR NK  V
Sbjct: 337 LPSYNGRLGILQVHARNKKLAEEVSLEAIARRTPGFSGAELANLLNEAAILTARRNKTAV 396

Query: 386 EMKEFELAKDKIMMGAERKTMVMSEKEKRNTAYHEAGHAIVGRLVPEHDPVYKVSIIPRG 445
           +  + + A D++ +G     ++ S+K KR  AYHE GHA++  L+   D + KV+IIPR 
Sbjct: 397 DETDIDDAIDRVTIGMTLSPLLDSQK-KRLIAYHEIGHALLMTLLKHSDRLDKVTIIPRS 455

Query: 446 RAL-GVTMFLPEE---DRYSLSKRALISQICSLYGGRIAEEMTLGFDGVTTGASNDIMRA 501
             + G    +P E   D    S+  L  +I    GGR AEE+  G   VT GA++DI   
Sbjct: 456 GGIGGFAKPIPNEELIDSGLYSRAWLRDRIVVALGGRAAEEVVFGDAEVTQGAASDIEMI 515

Query: 502 SQLARNMVTKWGLSEKLGPLMYAEEEGEVFLGRSAGSQHASVSGETAKLIDSEVRSIIDQ 561
           + LAR M+T++G+S+ LGPL    ++GEVFLGR   S+ A  S   A  ID ++R++I  
Sbjct: 516 TNLAREMITRYGMSD-LGPLALESDQGEVFLGRDWMSRRADYSESVAAQIDRKIRALIQT 574

Query: 562 CYATAKQLLIDNRDKLEAMTEALMKYETIDADQIDDIM 599
           C+A A+QLL++NR+ ++ + + L+  E I+ D+   I+
Sbjct: 575 CHAEARQLLLENRELMDRLVDRLIDQELIEGDEFRKIV 612