Pairwise Alignments

Query, 460 a.a., poly(A) polymerase from Pseudomonas putida KT2440

Subject, 480 a.a., poly(A) polymerase (RefSeq) from Shewanella loihica PV-4

 Score =  392 bits (1007), Expect = e-113
 Identities = 199/433 (45%), Positives = 278/433 (64%), Gaps = 11/433 (2%)

Query: 21  TTP-----EVINKSQHSLQRHQFSRHAVNIVERLQSAGYQAYLVGGCVRDLMLGITPKDF 75
           TTP     E++ +  H++ R   S +A+ ++ RL  +G++AYLVGG VRD++LG+ PKDF
Sbjct: 42  TTPAGLSLEIVARKHHAISRQHISENAIKVLYRLHKSGFKAYLVGGGVRDILLGLEPKDF 101

Query: 76  DVATSATPEQVRAEFRNARIIGRRFKLVHVHFGREIIEVATFRAHHSEDDQGDAHRSSHN 135
           DV T+ATPE+++  FRN R++GRRF+L H+ FGR++IEVAT R HH +  +     S  N
Sbjct: 102 DVVTNATPEEIKKLFRNCRLVGRRFRLAHIVFGRDVIEVATLRGHHVDSGE---KISKVN 158

Query: 136 ASGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGVHDVRNRLLRLIGDPTH 195
           A GR+LRDNVYGT++EDA+RRDFT+NALYYD     I  Y  G+ D+ +R LRLIGDP  
Sbjct: 159 AEGRLLRDNVYGTIDEDAERRDFTVNALYYDISDFSIHSYGGGLQDLESRTLRLIGDPQK 218

Query: 196 RYQEDPVRMLRAVRFAAKLDFGIEKHTYLPIRGLAPMLREIPPARLFEECLKLFLSGQGA 255
           RY+EDPVRMLRAVRFA KL   I+K    PI  LAP+L++IP AR++EE LKLF +GQ  
Sbjct: 219 RYREDPVRMLRAVRFATKLGMSIDKAAAQPISELAPLLKDIPAARMYEEVLKLFFAGQAQ 278

Query: 256 IAFEMLVDLELFEPLFPASAHALDERPT-YTHTLISQALNNTDLRVKQGKPVTPAFLFAA 314
             + M+ D  LF PLFP   + L+E P   +H ++   + NTD RV+Q K VTPAF +AA
Sbjct: 279 NNYVMMRDFGLFAPLFPLVDNLLEEDPKGPSHKMVKAIMRNTDERVEQDKSVTPAFFYAA 338

Query: 315 LLWPALPARVLHLQ-NQGVPPIPAMNGAAHDLIAEQCARIAIPKRFTLPIREIWDMQERL 373
           +LW  L  R   +    G+    A   A  D++ +QC  I+IP+RF+ P ++IW +Q R 
Sbjct: 339 MLWYPLSQRADDIALESGLSQYDAFYAAMGDVMEQQCRTISIPRRFSTPAKDIWQLQLRF 398

Query: 374 PRRSGKRADMLLDNPRFRAGYDFLLLR-ESAGEETDELGQWWTDYQDANDSERREMIREL 432
            R  G RA   +++P+FRA YD LLLR E+ G    +   WW  + + ++ +R  + R  
Sbjct: 399 ERNQGTRAFKFIEHPKFRAAYDLLLLRAEAEGGNLAKTAAWWKSFVEGSEEQRSVIARST 458

Query: 433 GSRDESAGPRKRK 445
                S   R+R+
Sbjct: 459 NKGSRSRNNRRRR 471