Pairwise Alignments

Query, 460 a.a., poly(A) polymerase from Pseudomonas putida KT2440

Subject, 158 a.a., hypothetical tRNA nucleotidyl transferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 61.6 bits (148), Expect = 2e-14
 Identities = 57/171 (33%), Positives = 81/171 (47%), Gaps = 23/171 (13%)

Query: 57  YLVGGCVRDLMLGITPKDFD-VATSATPEQVRAEFRNARIIGRRFKL-VHVHFGREIIEV 114
           YLVGG VRD +L +  KD D +   ATPEQ++      R +G+ F + +H    +E    
Sbjct: 4   YLVGGAVRDSLLNLPIKDKDYMVVGATPEQMQQ--LGYRQVGKDFPVFLHPKTQQEYALA 61

Query: 115 ATFRAHHSEDDQGDAHRSSHNASGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILD 174
            T R            +      G     +   TLE+D  RRD TINA+  D     + D
Sbjct: 62  RTER------------KVGLGYGGFSCYASPDVTLEQDLLRRDLTINAIAKDE-EGNLYD 108

Query: 175 YANGVHDVRNRLLRLIGDPTHRYQEDPVRMLRAVRFAAK---LDFGIEKHT 222
              G+ D++ R LR +   +  + EDP+R+LR  RFAA+   L F I   T
Sbjct: 109 PYQGIADIKARQLRHV---SAAFSEDPLRVLRVARFAARFHSLGFEIANET 156