Pairwise Alignments

Query, 460 a.a., poly(A) polymerase from Pseudomonas putida KT2440

Subject, 904 a.a., polyA polymerase family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 65.1 bits (157), Expect = 9e-15
 Identities = 78/252 (30%), Positives = 109/252 (43%), Gaps = 41/252 (16%)

Query: 40  RHAVNIVERLQSAGYQAYLVGGCVRDLMLGITPKDFDVATSATPEQVRAEFRNARIIGR- 98
           + A  + ERL   G   Y VGG VRDL+L     D D+            F  A + GR 
Sbjct: 475 QRAGRLGERL---GVSVYAVGGFVRDLLLDRPNYDLDLVIEGDGVAFARVFA-AEVGGRL 530

Query: 99  ----RFKLVHVHF-----GREIIEVATFRAHHSEDDQGDAHRSSHNASGRILRDNVYGTL 149
               +FK   V F       + ++VAT R  + E                 L      ++
Sbjct: 531 REHAKFKTALVIFTDENGAEQRVDVATARLEYYEYPAA-------------LPTVELSSI 577

Query: 150 EEDAQRRDFTINALYYDPVSE---RILDYANGVHDVRNRLLRLIGDPTHRYQEDPVRMLR 206
           + D  RRDFTINAL          R++D+     D++++ +R++   +  + EDP R+LR
Sbjct: 578 KMDLFRRDFTINALAVQLDGAQFGRLVDFFGSQRDMKDKGIRVLHSLS--FVEDPTRILR 635

Query: 207 AVRFAAKLDFGIEKHTYLPIR---GLAPMLREIPPARLFEECLKLFLSGQGAI----AFE 259
           AVRFA + DF I   T   I+   GL  M R   P R+F E L+L L  Q  +      E
Sbjct: 636 AVRFAVRYDFSIGPQTQRLIKNALGLGLMGRLSGP-RIFHE-LRLILEEQAPVECLARLE 693

Query: 260 MLVDLELFEPLF 271
               LE   PLF
Sbjct: 694 HFGVLEAIHPLF 705