Pairwise Alignments

Query, 460 a.a., poly(A) polymerase from Pseudomonas putida KT2440

Subject, 435 a.a., poly(A) polymerase (RefSeq) from Shewanella sp. ANA-3

 Score =  397 bits (1020), Expect = e-115
 Identities = 204/436 (46%), Positives = 287/436 (65%), Gaps = 10/436 (2%)

Query: 28  KSQHSLQRHQFSRHAVNIVERLQSAGYQAYLVGGCVRDLMLGITPKDFDVATSATPEQVR 87
           +  HS+ R Q S +A+ ++ RL  +G+QAYLVGG VRDL+LG+ PKDFDV T+ATPE+++
Sbjct: 3   RDAHSISRKQISENALKVLYRLNKSGFQAYLVGGGVRDLLLGLEPKDFDVVTNATPEEIK 62

Query: 88  AEFRNARIIGRRFKLVHVHFGREIIEVATFRAHHSEDDQGDAHRSSHNASGRILRDNVYG 147
             FRN R++GRRF+L H+ FGR++IEVATFR HH + ++     S  NA GR+LRDNVYG
Sbjct: 63  KLFRNCRVVGRRFRLAHIVFGRDVIEVATFRGHHGDSNE---KISKANAEGRLLRDNVYG 119

Query: 148 TLEEDAQRRDFTINALYYDPVSERILDYANGVHDVRNRLLRLIGDPTHRYQEDPVRMLRA 207
            ++EDA+RRDFT+NALYYD     I  Y  G+ D++   LRLIGDP  RY+EDPVRMLRA
Sbjct: 120 EIDEDAERRDFTVNALYYDISDYSIRSYGGGMEDLKAGTLRLIGDPETRYREDPVRMLRA 179

Query: 208 VRFAAKLDFGIEKHTYLPIRGLAPMLREIPPARLFEECLKLFLSGQGAIAFEMLVDLELF 267
           VRFA KL   IE+ T  PI+ LAP+L++IP AR++EE LKLF +G+    FEM+ + +LF
Sbjct: 180 VRFATKLSMAIEEVTAKPIKQLAPLLKDIPAARMYEEVLKLFFAGKAMANFEMMQEYKLF 239

Query: 268 EPLFPASAHALDERPTYTHTLISQA-LNNTDLRVKQGKPVTPAFLFAALLWPALPARVLH 326
            PLFP     L + P      + QA + +TD RV + KPVTP+F +AA+LW  L  R   
Sbjct: 240 APLFPQVDAQLKDAPKGPAMKMVQAIMKSTDARVNEDKPVTPSFFYAAILWYPLRQRAED 299

Query: 327 LQ-NQGVPPIPAMNGAAHDLIAEQCARIAIPKRFTLPIREIWDMQERLPRRSGKRADMLL 385
           +    G+    A   A  D+I +QC  I+IP+RF+ P ++IW +Q R  R  G RA  LL
Sbjct: 300 IAVESGLTLYDAFFAAMGDVIEQQCQTISIPRRFSTPAKDIWQLQLRFDRSQGTRAFKLL 359

Query: 386 DNPRFRAGYDFLLLR-ESAGEETDELGQWWTDYQDANDSERREMIRE----LGSRDESAG 440
           ++P+FRA YD LLLR E  G    +   WW  + +A+++ER  + R      G+R+ ++ 
Sbjct: 360 EHPKFRAAYDLLLLRGEVEGGNVAKSAAWWQQFVEADETERLNIARSGNKAAGNRNRNSP 419

Query: 441 PRKRKRSGSKRKRSGD 456
            R+R+R  + + ++ +
Sbjct: 420 QRRRRRPSAAKAKAAE 435