Pairwise Alignments

Query, 480 a.a., Nitrogen regulation protein NR(I) from Pseudomonas putida KT2440

Subject, 469 a.a., nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) from Shewanella sp. ANA-3

 Score =  281 bits (719), Expect = 3e-80
 Identities = 177/481 (36%), Positives = 262/481 (54%), Gaps = 31/481 (6%)

Query: 4   ILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERFSIATFDLIVSDLRLPGAPGTEL 63
           + I++D++ IR  L + L+  +   +   + +   +   I+   +IVSD+R+PG  G  L
Sbjct: 5   VWILDDDSSIRWVLEKALQGAKLSTASFAAAESLWQALEISQPRVIVSDIRMPGTDGLTL 64

Query: 64  IKLGQ----GTPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVARILRDRQNA 119
           ++  Q      PV+IMT+++ L SAV + + GA +Y+ KPFD DE +  V R L      
Sbjct: 65  LERLQIHYPHIPVIIMTAHSDLDSAVSAYQAGAFEYLPKPFDIDEAISLVERALTHATEQ 124

Query: 120 PAAAPPAEPRASNGKATASDKGSAATANGEIGIIGSCQPMQDMYSKIRKVAPTDSNVLIQ 179
             A    E +    +                 IIG    MQ+++  I +++ +  +VLI 
Sbjct: 125 SPAPAAQETQVKTPE-----------------IIGEAPAMQEVFRAIGRLSRSSISVLIN 167

Query: 180 GESGTGKELVARALHNLSRRAKAPMISVNCAAIPETLIESELFGHEKGAFTGASAGRAGL 239
           G+SGTGKELVA ALH  S R   P I++N AAIP+ LIESELFGHEKGAFTGA+  R G 
Sbjct: 168 GQSGTGKELVAGALHKHSPRKDKPFIALNMAAIPKDLIESELFGHEKGAFTGAANVRQGR 227

Query: 240 VEAADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKNL 299
            E A+GGTLFLDEIG++PL+ Q RLLRVL +G+  RVG   + +VDVR+IAATH+DL+ L
Sbjct: 228 FEQANGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGHSAVQVDVRIIAATHQDLEQL 287

Query: 300 AKAGQFREDLYYRLHVIALKLPALRERGSDVNEIANVFLARQSARIGRDDLHFSAEAEQA 359
              G FREDL++RL+VI + LP L +R  D+ ++A  FLA  +  IG +    + E    
Sbjct: 288 VLKGGFREDLFHRLNVIRVHLPPLSQRREDIPQLATHFLASAAKEIGVEAKILTKETAAK 347

Query: 360 IRHYSWPGNVRELENAVERAVILSESAEI-----SAELLGIDIELSDLDEDDILDNALVV 414
           +    WPGNVR+LEN      +++   EI       ELL     ++ + +      + + 
Sbjct: 348 LSQLPWPGNVRQLENTCRWLTVMASGQEILPQDLPQELLKEPASINPMAKGSQDWQSALT 407

Query: 415 ANAGNASHEPTEDL--SLEDYFQHFVLEHQDHMTE---TELARKLGVSRKCLWERRQRLG 469
                   E   DL   ++  F+  +LE     T+    E A++LG  R  L  + + L 
Sbjct: 408 EWIDQKLSEGNSDLLTEVQPAFERILLETALRHTQGHKQEAAKRLGWGRNTLTRKLKELS 467

Query: 470 I 470
           +
Sbjct: 468 M 468