Pairwise Alignments

Query, 991 a.a., Sensory box histidine kinase from Pseudomonas putida KT2440

Subject, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  282 bits (721), Expect = 1e-79
 Identities = 262/1004 (26%), Positives = 437/1004 (43%), Gaps = 101/1004 (10%)

Query: 10  MILISAGYLMVLFGVAWISERGLIPRSIIRHPLTYTLSLGVYASAWAFYGSVGLAYQYGY 69
           +I +S  YL VLF +AW  +R     +  R P  Y+LS+ VY ++W FYG+VG A    +
Sbjct: 6   VIPVSLAYLGVLFLIAWYGDRQTRWLANWR-PWIYSLSIAVYCTSWTFYGTVGQASVNPW 64

Query: 70  GFLACYLGVSGAFLLAPVLLYPILKITRTYQLSSLADLLAFRF-RSTWAGALTTIIMLIG 128
            FL  Y+     F+    +L  ++ I +   ++SLAD +A R+ +S       T+I ++G
Sbjct: 65  SFLPIYIAPILMFVFGWRVLARLILIAKREHITSLADFIAARYGKSQGLAVAVTVIAVLG 124

Query: 129 VLPLLALQIQAVADSISILTGEPV------KARVAFAFCTLIILFTIFFGSRHIATREKH 182
           +LP +ALQ++ +   ++I+  + +      ++ V++     + LFT+ FG+RHI   E H
Sbjct: 125 ILPYIALQLRGITMGLNIVAPDLMTVYGYQESHVSWFVVLALALFTMLFGTRHIDNTEHH 184

Query: 183 EGLVFAIAFESVIKLLALGGIGLYALYGVFGGPHELEVWLLQNQTALAALHTPLQEGPWR 242
            G++ AIAFES++KL+A   +G++  Y           W            +  Q   W 
Sbjct: 185 RGMMMAIAFESIVKLVAFLCVGVFIAY---------LAWRTDGLELSTIAASTYQAPNWP 235

Query: 243 TLL---LVFFASAIVMPHMYHMAFTENLNPRSLVSASWGLPLFLLLMSLAVPLVLWAGLR 299
           TLL   L+   + + +P  +H    EN  P+ L +A W  P++LLLMSL V  + W G  
Sbjct: 236 TLLIHTLLTMIAIVCLPRQFHTMVVENERPQDLHTARWLFPVYLLLMSLFVLPIAWTGQG 295

Query: 300 LGASTNPEYFTLGLGIAANNQALALLAYIGGLSAASGLIIVTTLALSGMALNHLVLPL-- 357
           L  +T+P+ F + L + A    +ALLA++GG SAASG++IV+T+AL+ M  N LV+PL  
Sbjct: 296 LLPNTSPDTFVISLPVFAGAHDIALLAFLGGTSAASGMVIVSTIALAIMVSNDLVMPLLL 355

Query: 358 ----YQPPAEGNIYRWLKWTRRALIVAIITAGFMFYLSQNYHQSLANLGIVAFVATLQFL 413
                      +    L   RR LI+ ++   + FYL  +   SL+ +G ++F A  QF 
Sbjct: 356 RRMRLSQRTHRHFSGLLVVIRRTLILLLLFGAWGFYLVLDSIPSLSAIGFLSFSAITQFA 415

Query: 414 PGVLSVLYWPTANRRGFIAGLLAGTLVWMVTMLLP---LLG----NLQGFYIPLLDMIYV 466
           P +   +YW   NR+G   GL  G  +W++T++     L G    N+  + I   D +  
Sbjct: 416 PAIFGGMYWREGNRKGVYVGLAVGFTLWLITLMSATDMLAGDASNNVLLWVITPPDWLVA 475

Query: 467 LDDTSWHMAAIASLAANVLLFTLISLFTNASTEEVSAAEACAVDNVRRPQRRELHAASPQ 526
           L   S     + S+  N L +  +SL T AS  E    +A A      P+   +     +
Sbjct: 476 LGLKSADWGMLLSVTLNTLCYIGVSLVTRASLSE--RLQAAAFVGTPLPENENMSLYQSR 533

Query: 527 EFATQLAKPLGAKAAQKEVEQAL-------RDLYLPFDERRPYALRRLRDRIEANLSGLM 579
               +L         +  V  A        R+  LP +++   AL R  +R+   L+G+ 
Sbjct: 534 VTVGELEMLASRFVGRTRVRNAFAQYWSQQRETLLP-NQQASSALIRHTERV---LAGVF 589

Query: 580 GPSVAQDMVETFLPYKSGNENYVTEDIHFIESRLEDYHSRLTGLAAELDALRRYHRQTLQ 639
           G S A+ ++ + L    G +  + E    ++   E Y           D  R   +  ++
Sbjct: 590 GASSAKLVLTSAL---QGRKMQLEEVATIVDEASELY-----------DFSRGLLQGAIE 635

Query: 640 ELPMGVCSLAKDQEILMWNKAMEELTGIAAKHVVGSRLVTIDEPWRGLLQGFINV--PDE 697
            +  G+  + K   ++ WN+   EL       +   R +  D       QG      P++
Sbjct: 636 HIGQGIAVVDKQLRLVAWNQRYLELFEFPPGLIQVGRPIA-DVIRHNAQQGLCGPGDPED 694

Query: 698 HLHKQRLALDGQPRWLNLHKAAIDEPL-APGN----SGLVLLVEDLT------------- 739
           H+ ++   L+      +    A    +   GN     G V+   D+T             
Sbjct: 695 HVRRRVYHLEQGTSHTSSRVRADGRVIEVQGNPMPGGGFVMSFTDITVFREAEQSLKMAN 754

Query: 740 ------------ETQALEDKLV----HSERLA-SIGRLAAGVAHEIGNPITGIACLAQNL 782
                       E + L  +LV     SER + S  R  A V+H++  P+      A +L
Sbjct: 755 ETLEERVLQRTLELEKLNKQLVTATQRSERESQSKSRFLAAVSHDLMQPLNAARLFASSL 814

Query: 783 REEREDDGEIIELSSQILDQTKRVSRIVQSLMSFAH-AGGSHQNSEEPVCLAEVAQDAIG 841
            E  + + E+ +L+  I         ++  L+  +    G          + +V  +   
Sbjct: 815 SEVAK-EAEVQKLAHHIESALGAAEDLISDLLDISRLESGKIDLHPHSFAIMDVLSNLNA 873

Query: 842 LLALNRRNFEVQFFNLCDPDHWAEGDPQRLAQVLINLLSNARDASPPGSAVRVRSEVNEH 901
             +       VQ F+L     W   DP+ L +V+ N L+NA   +P G  +     V   
Sbjct: 874 EFSALAAKQGVQ-FSLVPSLLWVHSDPKLLRRVIQNFLTNAFRYNPNGKVILGVRRVATG 932

Query: 902 TVDLIVEDEGSGIPKNIMDRLFEPFFTTKDPGEGTGLGLALVYS 945
            V + V D G GI ++    +FE F          GLGL L  S
Sbjct: 933 QVRIDVWDNGIGIEQDKQQEIFEEFNRGGQVRSDQGLGLGLAIS 976