Pairwise Alignments

Query, 991 a.a., Sensory box histidine kinase from Pseudomonas putida KT2440

Subject, 1168 a.a., sensory transduction histidine kinase transmembrane protein from Sinorhizobium meliloti 1021

 Score =  270 bits (691), Expect = 3e-76
 Identities = 257/1037 (24%), Positives = 452/1037 (43%), Gaps = 112/1037 (10%)

Query: 17   YLMVLFGVAWISERGLIPRSIIR--HPLTYTLSLGVYASAWAFYGSVGLAYQYGYGFLAC 74
            YL++LF VA   +R      I     PL Y LSL +Y ++W ++G VGLA + G  F   
Sbjct: 14   YLLLLFAVASYGDRRARRNEIAAKGRPLVYALSLAIYCTSWTYFGGVGLAAERGLEFTGI 73

Query: 75   YLGVSGAFLLAPVLLYPILKITRTYQLSSLADLLAFRF-RSTWAGALTTIIMLIGVLPLL 133
            Y+G    F L   L+  I+++ +T +L+S+AD +A R+ ++    A+  +I L+G +P +
Sbjct: 74   YIGPILMFTLGMPLIRRIVRLAKTEKLTSVADFVAARYGKNPAVAAIVALISLVGAIPYI 133

Query: 134  ALQIQAVADSISILTGEP---VKARVAFAFCTLIIL-----FTIFFGSRHIATREKHEGL 185
            ALQ++AV+ S++ +       + +   F    L++      F I FG+RH    E  +GL
Sbjct: 134  ALQLKAVSSSVATMIDTSDYGIGSGENFVDLPLLVTLFLACFAIVFGTRHTDATEHQDGL 193

Query: 186  VFAIAFESVIKLLALGGIGLYALYGVFGGPHELEVWLLQNQTALAALHTPLQEGPWRTLL 245
            + AIA ESV+KL+A+  +G+Y ++ +FGGP  L     Q+ T +AAL        W  ++
Sbjct: 194  ILAIAMESVVKLVAMLTVGVYIVFVLFGGPANLWAEAQQSVTVIAALEYQTPVARWILMI 253

Query: 246  LVFFASAIVMPHMYHMAFTENLNPRSLVSASWGLPLFLL-LMSLAVPLVLWAGLRLGAST 304
             +     I++P  +H+   EN     L +A    PL+L+ + +  +P+ +   L    S 
Sbjct: 254  ALSAFGIIMLPRQFHVTVVENRTDNELRTAGILFPLYLIAINAFVLPIAIAGILTFSGSG 313

Query: 305  NPEYFTLGLGIAANNQALALLAYIGGLSAASGLIIVTTLALSGMALNHLVLPLY---QPP 361
            N + + L L +A +   + L  +IGG SAA+ ++IV ++ALS M  N +V+P++   +  
Sbjct: 314  NADLYLLALPLAGDVPLVTLFTFIGGFSAATAMVIVASVALSIMVSNDIVMPVFLRRRLG 373

Query: 362  AEGNIYRWLKWT----RRALIVAIITAGFMFYLSQNYHQSLANLGIVAFVATLQFLPGVL 417
              G++   +  T    RR  I  ++  G+ +Y + +    LA+LG+++F A  Q  P +L
Sbjct: 374  TRGSLQEDMAGTLLNIRRTAIFVVLFLGYGYYRAADISAGLASLGLLSFAAIAQMAPALL 433

Query: 418  SVLYWPTANRRGFIAGLLAGTLVWMVTMLLPLLG---------NLQGFYIPLLDMIYVLD 468
              L W  AN RG IAG+++G LVW   + LP LG          +  F +P  D+     
Sbjct: 434  GGLVWRQANARGAIAGMVSGFLVWAYVLFLPSLGGPDNSHIASTVLSFLLPFTDLFSGAQ 493

Query: 469  DTSWHMAAIASLAANVLLFTLISLFTNASTEEVSAAEACAVDNVRRPQRRELHAASPQEF 528
                  A   S+  NV  + + SL    + + +   +A      R    R       +  
Sbjct: 494  SDPLVNATALSMLVNVAAYIVGSL--TRAPKPLERFQAGVFITRRSRTERTFRGRKTKVT 551

Query: 529  ATQLAKPLGAKAAQKEVEQALRDLYLPFDERRPYALRRLRDRIEANLS------GLMGPS 582
               L   +G    ++ ++++       F      + R L D   A+++       L+G +
Sbjct: 552  VRDLKTTIGRYMGEERMQRS-------FHTYEQQSGRWLDDNASADMALVHFSEQLLGSA 604

Query: 583  VAQDMVETFLPYKSGNENYVTEDIHFIESRLEDYHSRLTGLAAELDALRRYHRQ----TL 638
            +        L                +  R++D  S    L  +     +Y++      L
Sbjct: 605  IGSSSARLVL--------------SLVLQRMDDTSSDTAWLLDQASEALQYNQDMLHTAL 650

Query: 639  QELPMGVCSLAKDQEILMWNKAMEELTGI-AAKHVVGSRLVTI-----------DEPWRG 686
             ++  G+        +++WN+   EL  +  A   VG  L  I            +  + 
Sbjct: 651  SQMDQGIAVFDNANNLIIWNRRFRELMDLPEAAGQVGFPLADIVAILARRGDVRKDEEKA 710

Query: 687  LLQGFINVPDEHLHKQRLALDGQPRWLNL------------------HKAAIDEPLAPGN 728
            L+  F+ +    L    L L G  R + +                   + A D  L   N
Sbjct: 711  LIANFLTLDKPFL----LELAGGARIVEVRSNAMPDKGIVTTYTDITQRVAADMALKQAN 766

Query: 729  SGLVLLVEDLTETQALEDKLVHSERL----ASIG--RLAAGVAHEIGNPITGIACLAQNL 782
              L L V + T      ++ +   R     A+IG  R  A   H+I  P+      + +L
Sbjct: 767  ETLELRVAERTGELTRVNRELGEARAAAEEANIGKTRFFAAAGHDILQPLNAARLYSSSL 826

Query: 783  REEREDDGEIIELSSQILDQTKRVSRIVQSLMSFAHAG-GSHQNSEEPVCLAEVAQDAIG 841
              ER  D +   L   I    + V  I+ +++  +    G+ +   + V L E+ +    
Sbjct: 827  -VERLGDSDNRALVQNIDSSLESVEAILGAVLDISRLDTGAMKPRLQSVPLDELLRRIET 885

Query: 842  LLALNRRNFEVQFFNLCDPDHWAEGDPQRLAQVLINLLSNARDASPPGSA-VRVRSEVNE 900
              A   R  +++   +      A  DP  L +++ NL+SNA   +  G   V VR     
Sbjct: 886  DFAPMARAKDIELV-IMPTSLAARSDPNLLRRLVQNLVSNAIKYTLRGKVLVGVRRHGQT 944

Query: 901  HTVDLIVEDEGSGIPKNIMDRLFEPFFTTKDPGEGTGLGLALVYSIVEEHYGQITIDSPA 960
             T++++  D G GIP +    +F+ F   ++ G  T  GL L  SIV+       ++ P 
Sbjct: 945  ATIEVL--DSGIGIPSSKFRTIFKEFARLEE-GARTASGLGLGLSIVDRI--SRVLNHPV 999

Query: 961  DIERQ--RGTRIRVTLP 975
             ++ +  +GT  +VT+P
Sbjct: 1000 GLQSKPGKGTGFKVTVP 1016