Pairwise Alignments

Query, 991 a.a., Sensory box histidine kinase from Pseudomonas putida KT2440

Subject, 1179 a.a., sensory box sensor histidine kinase/response regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  275 bits (703), Expect = 1e-77
 Identities = 297/1070 (27%), Positives = 467/1070 (43%), Gaps = 167/1070 (15%)

Query: 12   LISAGYLMVLFGVAWISERGLIPRSIIRHPLTYTLSLGVYASAWAFYGSVGLAYQYGYGF 71
            +IS  YL VLF VA   +     +   R P  Y+LSLGV  ++WAFYG+VG A   G   
Sbjct: 26   VISIAYLAVLFIVAQWGQNQPFGQWRKR-PWVYSLSLGVCCTSWAFYGTVGQAATTGAWL 84

Query: 72   LACYLGVSGAFLLAPVLLYPILKITRTYQLSSLADLLAFRF-RSTWAGALTTIIMLIGVL 130
               Y+G     +LA  +L   L I ++  L+S+AD +A RF RS    A   ++ L+G +
Sbjct: 85   APIYIGSIVCLVLAWPMLMRTLHIVKSQNLTSIADFIACRFDRSPKIAASVAMVSLLGTI 144

Query: 131  PLLALQIQAVADSISILTGEPVKA-RVAFAFCTLIILFTIFFGSRHIATREKHEGLVFAI 189
            P +ALQ++A++ S  +LTG        AF    ++I+F+I FG+R ++  ++++GLV AI
Sbjct: 145  PYIALQLRAISTSFDLLTGTFQSGISTAFIVTIVLIIFSILFGTRQLSASKQNQGLVLAI 204

Query: 190  AFESVIKLLALGGIGLYALYGVFGGPHELEVWLLQNQTALAALHTPLQEGPWRTLLLVFF 249
            AF SV+KLLAL  +G++A + +F G  +L   L + Q    AL T         +L    
Sbjct: 205  AFSSVVKLLALTTVGIFATFYIFDGFSDL---LTRGQ----ALPTSKDANSLYFVLSQIL 257

Query: 250  ASAIV---MPHMYHMAFTENLNPRSLVSASWGLPLFLLLMSLAV-PLVLWAGLRL-GAST 304
              AI    +P  +HM   EN + + L SA W +PL+LLLM+  + P+ L   L   G S 
Sbjct: 258  LGAITIYALPQEFHMMMIENHHAKELKSARWMVPLYLLLMNAFILPIALAGQLSFPGGSV 317

Query: 305  NPEYFTLGLGIAANNQALALLAYIGGLSAASGLIIVTTLALSGMALNHLVLPLY------ 358
            + + + L L +      L +L Y+GGL+AA+ ++IV  + LS M    ++ PL       
Sbjct: 318  DADTYVLTLPLFYQQAWLGVLVYLGGLAAATAMVIVAAIVLSTMISTEILTPLLLRLPRF 377

Query: 359  ---QPPAEGNIYRWLKWTRRALIVAIITAGFMF--YLSQNYHQSLANLGIVAFVATLQFL 413
               Q P    I   L   RR  I AI+ + F F  Y+ Q  H  LA++G+++FV   QF 
Sbjct: 378  SSQQTPQLAGILLNL---RRIAIAAILLSAFAFERYIDQQNH--LASIGLLSFVLLSQFA 432

Query: 414  PGVLSVLYWPTANRRGFIAGLLAGTLVWMVTMLLPLLGNLQGFYIPLLDMIYVLDDTSWH 473
            P  +  LYW  AN +G   G+L G+LVW+ T+LLP             D  +V+    WH
Sbjct: 433  PAAIGALYWRRANTQGAFWGMLLGSLVWLYTLLLP---------ATFPDANWVIHG-PWH 482

Query: 474  MAAIA-------------------SLAANVLLFTLISLFTNASTEEVSAAEACAVDNVRR 514
            +  +A                   SL  N+  F LIS F   S  E+  A+      V R
Sbjct: 483  IGWLAPHALFGLNGLDNISHGLFYSLLVNIGSFVLISHFREQSVGELLQADVF----VNR 538

Query: 515  PQRRELHAASPQEFATQLAKPLGAKAAQKEVEQALRDLYLPFDERRPYALRRLRDRIEAN 574
             Q +     S  + A+ L + +  + A   + +A R L      RR      L D     
Sbjct: 539  KQLQLERHLSVSDLASLLHRFINKEEADALMAKA-RQLGSELSSRR----EELVDYTRLK 593

Query: 575  LSGLMGPSVAQDMVETFLPYKSGNENYVTEDIHFIESRLEDYHSRLTGLAAELDALRRYH 634
            LSG++G S +  MV   +   S  +    ED+                +  E + +  ++
Sbjct: 594  LSGVLG-SASTRMV---MNAASRAQQVPLEDV--------------VSIVDEANQIFEFN 635

Query: 635  RQTLQ----ELPMGVCSLAKDQEILMWNKAMEELTGIAAKHVVGSRLVTIDEPWRGLLQG 690
            R+ LQ     +  G+  +  D  ++ WNK   EL      +V     + I++  R  ++ 
Sbjct: 636  RELLQSGVENIEQGISVVDADMRLVAWNKRYIELLDYPKDYVKAG--IPIEKLLRYNIER 693

Query: 691  FINVPDE--HLHKQRLA--LDGQPRWL--NLHKAAIDE---PLAPGNSGLVLLVEDLT-- 739
             I V DE   L ++RLA    G P      +H   + E      PG  G V    D+T  
Sbjct: 694  GIIVGDEAHELVEKRLAHMRSGSPHHFQRTMHDGRVLEIRGQAMPG-GGFVSTFSDITAH 752

Query: 740  ---------ETQALEDKLVHSER------------LASIGRLAAGVAHEIGNPITGIACL 778
                       + LE ++    R             +S  R  A  +H++  P   +   
Sbjct: 753  IQAEKALQQANETLEKRVESRTRELAKAKAEAEAANSSKTRFLAAASHDLMQPFNALTLF 812

Query: 779  AQNLREEREDDGEIIELSSQILDQTKRVSRIVQSLMSFAHAGGSHQNSEE-PVCLAEVAQ 837
             + L+ +R    E+ +L++ I D    V  ++  L+  +    S   +E+    + ++  
Sbjct: 813  TEMLK-QRVTSTELQDLATHIEDSLNVVESLLSDLVEISRLDSSSLKTEQSQFAIDDLLS 871

Query: 838  DAIGLLALNRRNFEVQF---FNLCDPDHWAEGDPQRLAQVLINLLSNARDASPPG----- 889
              +    +  +   ++F   F+ C    + + D + L +++ N LSNA   SP G     
Sbjct: 872  TLVNEFRVLSKQQGIEFGYQFSSC----FVQSDQRLLRRIIQNFLSNAFHYSPAGALNQI 927

Query: 890  -SAVRVRSEVNEHTVD--------------------LIVEDEGSGIPKNIMDRLFEPFFT 928
             SA RV+ E  E                        + V D G GIP      +F  F  
Sbjct: 928  QSATRVKLEGGESLTSDVEFMPRVVLGVRRRQDSLLIQVWDNGPGIPAEKQQAIFGEFER 987

Query: 929  TKDPGE--GTGLGLALVYSIVEEHYGQITIDSPADIERQRGTRIRVTLPR 976
             +   E  G GLGLA+   I +    +I + S    E  +GT   V +PR
Sbjct: 988  LEQTREIPGLGLGLAICDRIAKLLGIRIYLHS----ELGKGTCFSVEVPR 1033