Pairwise Alignments

Query, 773 a.a., transglycosylase/transpeptidase from Pseudomonas putida KT2440

Subject, 817 a.a., penicillin-binding 1A transmembrane protein from Sinorhizobium meliloti 1021

 Score =  165 bits (418), Expect = 8e-45
 Identities = 96/261 (36%), Positives = 149/261 (57%), Gaps = 8/261 (3%)

Query: 166 EDRILIKIDQVPKYLLETLVATEDREFYSHFGVSPKSIVRAMWVNTS---SGSMRQGGST 222
           E R+ + I  +P  +    ++ ED+ FY H G+    + RA+ VN     SG    G ST
Sbjct: 65  ERRLYLPIQAIPDRVKAAFISAEDKNFYQHPGIDVTGLARAIAVNLQNFGSGRRPVGAST 124

Query: 223 LTQQLVKNFYLSSERSLSRKLTEAMMAVLLELHYDKREILEAYLNEVFVGQDGQRAVHGF 282
           +TQQ+ KNF LSS+++L RK+ EA+++  +E  Y K  ILE YLNE+F G +     +G 
Sbjct: 125 ITQQVAKNFLLSSDQTLDRKIKEAILSFRIEQAYSKDRILELYLNEIFFGLNS----YGI 180

Query: 283 GLASQFFFSQPLSELKLHQIALLVGMVKGPSYYNPRRHPERALARRNLVLDLVAEQGVAS 342
             A+  +F + ++EL + + A L  + KGP+ Y+P R  E A+ RRN V+D + E G  +
Sbjct: 181 AGAALTYFDKSVTELTIAETAYLAALPKGPANYHPFRKVEAAIERRNWVIDRMVENGYVT 240

Query: 343 QAEVDAAKKMPLGV-TKRGSLADSSFPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPI 401
           +A+ + AK+ PLGV  +RG     +   F + V+RQ+ Q Y D+ L E GL + TS DP 
Sbjct: 241 KADGEEAKQQPLGVKPRRGGAHLFASDFFAEEVRRQIIQKYGDKALYEGGLSVRTSLDPR 300

Query: 402 LQMKAETSMSETFKRLAGRKG 422
           LQ+ A  ++ +       R+G
Sbjct: 301 LQIAARKALQDGLLSYDERRG 321



 Score =  139 bits (351), Expect = 5e-37
 Identities = 99/303 (32%), Positives = 149/303 (49%), Gaps = 31/303 (10%)

Query: 426 VEAAMVVTNPETGEVQALIGSRQAGFAGFNRAIDAVRPIGSLVKPSVYLTALEQPSKYTL 485
           V+  +V  +P TG V A++G    G + FNRA  A+R  GS  KP VY  AL+  + YT 
Sbjct: 438 VQGGLVAMDPHTGRVLAMVGGFSYGQSEFNRATQAMRQPGSAFKPFVYAAALD--NGYTP 495

Query: 486 TSWVQDEPFSVKGADGQVWRPQNYDRRPHGTIYLYQGLANSYNLSTAKLGLEVGVPNVIK 545
            S + D P  +  A GQVWRP+NY     G   L  G+  S NL T +L  ++G+  V +
Sbjct: 496 ASVILDAPIEIV-AGGQVWRPENYGGGSAGPSTLRLGIEKSRNLMTVRLANDLGMNIVAE 554

Query: 546 TIGRLGVNVDWPAFPAMLLGAGGMSPMQVATMYQTIANGGFNTPMRGIRSVLTAEGEPLK 605
              R G+        AM LG+G  + +++ + Y  IANGG       I  +    G+ + 
Sbjct: 555 YAERFGIYDKMAPLLAMSLGSGETTVLRLVSAYAVIANGGKQIKPSLIDRIQDRYGKTIF 614

Query: 606 RY------------------PFQI---QQTFDPGAIYLVQNAMQRVMREGTGRSVYNTLP 644
           R+                  P  I   +Q  DP   Y + + M+ V+  GT       + 
Sbjct: 615 RHEDRACENCNADDWEAQEEPVLIDNREQVLDPMTSYQITSMMEGVVARGTAA---GKIK 671

Query: 645 RSLTLAGKTGTSNDSRDSWFSGFSQDLLAVVWMGRDDNGKTPFTGATG---ALQVWTSFM 701
               +AGKTGT+ND +D+WF G++ DL+A +++G DD       GATG   +  ++ +FM
Sbjct: 672 LDRPVAGKTGTTNDEKDAWFVGYTPDLVAGLYLGFDDPAPLG-RGATGGGLSAPIFNAFM 730

Query: 702 KKA 704
           +KA
Sbjct: 731 QKA 733