Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease from Pseudomonas putida KT2440

Subject, 697 a.a., DNA helicase/exodeoxyribonuclease V, alpha subunit from Pseudomonas syringae pv. syringae B728a

 Score =  970 bits (2508), Expect = 0.0
 Identities = 506/695 (72%), Positives = 569/695 (81%), Gaps = 7/695 (1%)

Query: 1   MSRSLVDLLPTPLHAEHLLALAPQHNSADLLQLLDRWVERGWLRALDRAFVSFLEERAPG 60
           MSRS  DLLPT L    L  L+P    +DLL LL+RWVERGWLRALD+AFV+FL +  P 
Sbjct: 1   MSRSFDDLLPTALDDISLAELSPLTRVSDLLILLERWVERGWLRALDKAFVAFLSDLDPQ 60

Query: 61  SDPLLLLAAALASHQLGHGHVCLDLQQTLAEPDFALSLPPEGDALIGPLLLPSQLLANLD 120
           +DPL+L+AAAL SHQLGHGHVCLDL +TL EPDFALSLPPEGD    P+LLPSQLLA LD
Sbjct: 61  ADPLVLVAAALTSHQLGHGHVCLDLYETLKEPDFALSLPPEGDQQSAPMLLPSQLLAALD 120

Query: 121 LNAWLQRISASPLVA-AGDTPGQ-QARPLVRSGERLYLRRYWSYERRIDQALRQRLSQAE 178
             AW Q ++AS LVA  GD   + + +PLV +  RLYLRRYW+YERRI  ALRQRL+Q E
Sbjct: 121 GAAWCQALAASMLVAEVGDLSAEARQKPLVLAERRLYLRRYWTYERRIAAALRQRLAQRE 180

Query: 179 APPADLPERLAQLF--EGGAPAGQVDWQKLACALATRAGFSIITGGPGTGKTTTVVRLLA 236
            PP  LP+RL  LF     +P   +DWQKLACALATR GFSIITGGPGTGKTTTVVRLLA
Sbjct: 181 TPPEGLPQRLDALFGPADSSPQAVIDWQKLACALATRKGFSIITGGPGTGKTTTVVRLLA 240

Query: 237 LLQAPAVEQGRPLRIRLAAPTGKAAARLTESIGQQVERLQVSAEVRGQIPTEVSTVHRLL 296
           LLQAPAV+ G+PLRIRLAAPTGKAAARLTESI QQV+ L VS +VR +IP+EV+TVHRLL
Sbjct: 241 LLQAPAVQSGQPLRIRLAAPTGKAAARLTESISQQVQSLDVSDDVRQKIPSEVTTVHRLL 300

Query: 297 GSRPGSRHFRHHAGNPLPLDVLVVDEASMIDLEMMANLLDALPPRARLVLLGDKDQLASV 356
           GSRPG+RHFRHHAGN LPLDVLVVDEASMIDLEMMANLL ALP  AR+VLLGDKDQLASV
Sbjct: 301 GSRPGTRHFRHHAGNLLPLDVLVVDEASMIDLEMMANLLYALPAHARMVLLGDKDQLASV 360

Query: 357 EAGAVLGDLCRDAEEGFYSPATAAWLQQVSGESLAGSGLKAGDEQRHPLAQQVVMLRFSR 416
           EAGAVLGDLCRDAEEGFYSP T AWL+ VSGE L   GL+ GD Q+HPLAQQVVMLR SR
Sbjct: 361 EAGAVLGDLCRDAEEGFYSPDTQAWLEAVSGEDLGKGGLRQGDAQQHPLAQQVVMLRHSR 420

Query: 417 RFGEGSGIGQLARLVNRQDAHAARNLLAA-PPADVHSLSLKHEQDRAFDRLLLDGLNRGT 475
           RFG+GSGIGQLARLVN+Q    AR LL+A    D+ +L+LK EQD  F+RL+LDGL RG 
Sbjct: 421 RFGQGSGIGQLARLVNQQQDQQARALLSAGSHDDLFALALKGEQDLKFERLVLDGLGRGE 480

Query: 476 DGPQGYRSYLRTLGRYRPALDTAFDDPAWEQWAGKVLRSFEDFQLLCAVRRGAWGVEGLN 535
            GPQGYR YL  L   RPA D+A DD  W +WA  VL +F+ FQLLCAVR+G WGVEGLN
Sbjct: 481 QGPQGYRHYLNVLAAERPADDSALDDACWTRWARSVLSAFDAFQLLCAVRKGPWGVEGLN 540

Query: 536 ERVARVLHNAGLIDSQQPWYEGRPVLVTRNDYGLGLMNGDIGIALRLP--DEHGQPLLRV 593
           +R+   L +A LI+S+Q WYEGRPVL+T NDYGLGLMNGDIGI LRLP  D  G+ +LRV
Sbjct: 541 QRITHALFSAKLIESEQQWYEGRPVLMTHNDYGLGLMNGDIGITLRLPERDGEGKQVLRV 600

Query: 594 AFPRNDGSGGVRFVLPSRLNEVETVFAMTVHKSQGSEFSHTALVLPEALNPVLTKELVYT 653
           AFPRNDGS GVRFVLPSRLNEVETV+AMTVHKSQGSEF+HTAL+LPEALNPVLTKEL+YT
Sbjct: 601 AFPRNDGSEGVRFVLPSRLNEVETVYAMTVHKSQGSEFAHTALILPEALNPVLTKELIYT 660

Query: 654 GITRAKHCFSLVEPRQGIFEEAVARKVRRISGLML 688
           GITRAKH FSL+EPRQGIFEEA+ RKV+R+SGLML
Sbjct: 661 GITRAKHWFSLIEPRQGIFEEALRRKVKRLSGLML 695