Pairwise Alignments

Query, 293 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 323 a.a., ndhF3 operon transcriptional regulator from Synechococcus elongatus PCC 7942

 Score = 93.2 bits (230), Expect = 7e-24
 Identities = 58/238 (24%), Positives = 113/238 (47%), Gaps = 1/238 (0%)

Query: 5   LIDLKLFQHTLECGNITAGAGRSHLSLPAASARIRAMEASLGIPLLERNRRGVQPTPAGQ 64
           L  LK+F+      + T  A   +L+ P  S +++ +  ++G+PL E+  + +  T AG+
Sbjct: 6   LHQLKVFEAAARHSSFTRAAEELYLTQPTVSIQVKQLTKAVGLPLFEQIGKRLYLTEAGR 65

Query: 65  ALLQHARLITQQVERLQFDLGQYAQGQQGQVRLLCNTAALTEYLPELLASYLAENPGVSV 124
            L +  R + +Q+E+L   +      +QGQ+RL   T A   ++P L+  +    PG++V
Sbjct: 66  QLYKTTRQVFEQLEQLDMTIADLQGMKQGQLRLAVITTA-KYFIPRLIGPFCQRYPGINV 124

Query: 125 DVQELPSLRIVQAITQGMADLGIVSTAAPSEHLQTRPFRDDPLVLVTPQAHPLASALAPS 184
            ++      ++  I   + DL ++S       +  +PF D+PLV+V P +HPLA+    S
Sbjct: 125 SLKVTNHEGLINRINDNLDDLYVLSRPPSGFDITVQPFLDNPLVVVGPASHPLANQRGIS 184

Query: 185 FVDSLAHGYVGLGAGSALGLYLEEQALHEGQRMQVRVRAEGFDGVIRMVAGGAGIGVV 242
                   ++    GS      E+        + V++     + + + + GG G+ V+
Sbjct: 185 LERLAQEPFILRERGSGTREATEQLFAAHNLNLNVKLDLGSNEAIKQAILGGLGLAVL 242